| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0418 |
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| Symbol | pdhR |
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| ID | 5660818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 511158 |
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| End bp | 511910 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641234955 |
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| Product | transcriptional regulator PdhR |
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| Protein accession | YP_001500281 |
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| Protein GI | 157960247 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTATA GCAAAATAAA CCAGCCAAAA ATATCCGATG TCATTATGGG ACAGTTGGAG
CAGATGATTC TGGAAGGCAG TATTCAACCA GGACAAAAGC TACCACCTGA ACGTGAACTG
GCATTGCAAT TTGAAGTTTC GCGCCCTTCT TTACGTGAAG CGATTCAAAA ATTAGAAGCA
AAGGGCTTGT TGATGCGTCG TCAAGGCGGC GGAACCTATG TAAAAGAGCA ACTCTGGCAA
AGTCTTGCCG ACCCAATTGT TGAACTCATG CATTCAGATT CAGAAAGTCA GTACGACTTA
CTGGAGTTTC GTCATGCCAC TGAAGGCATG ATGGCGTATT TTGCAGCGCT TCGTGGTAAC
GACGCCGATA TGCAAAATAT TAAGCGTACG ATTCTGGAAG TTGAGTCAGC TAATTTAATT
GAAGATCAAG CTAATGCGAT TGTGCGTTTT TACCGCGCAG TTGCCGAAGC GTCACACAAT
GTGGCTATGC TTCACCTTGT ATTAAGTTTA TCTCCAGTGC TGCATAAAAA CGTGGCACAA
AACTTAGAGC TTTTAAGCCG ACGCGAAGAA GCCTCTACAA CGGCTAATGA TCACAGACGA
GCGCTGCTTG CTGCAATTAT TCGCCGCGAC CCAGAAGCTG CACGCGAAGC CTCCAATGAA
CACTTAAGTT ACATTGAAGA GGTGATGCTG TCAGTAAGGG AAGAAGACAG CCGATTGCAG
CGTAGCCTGC GTCGTTTAAA GAGTGGTGTA TAG
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| Protein sequence | MAYSKINQPK ISDVIMGQLE QMILEGSIQP GQKLPPEREL ALQFEVSRPS LREAIQKLEA
KGLLMRRQGG GTYVKEQLWQ SLADPIVELM HSDSESQYDL LEFRHATEGM MAYFAALRGN
DADMQNIKRT ILEVESANLI EDQANAIVRF YRAVAEASHN VAMLHLVLSL SPVLHKNVAQ
NLELLSRREE ASTTANDHRR ALLAAIIRRD PEAAREASNE HLSYIEEVML SVREEDSRLQ
RSLRRLKSGV
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