| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0404 |
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| Symbol | |
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| ID | 5660804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 489235 |
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| End bp | 491925 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641234938 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001500267 |
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| Protein GI | 157960233 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0380405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTA ATAAAGTTGC TAAATTTATT AGCTTGGCGT GTGGTGGTGT AATGGCCCTC
TCTGCGCCAG TCTATGCCGC GGAAACAGAG GAAGATAGTG TAGAGCGTAT TGAGGTTACC
GGTTCGCGTC TAAAGCGTGT TGATATGGAA GGTGCAACAC CTGTAACAAC GATTACTGCT
GAAGATATGG CTGTCGCTGG TTTCTCTACA GTAGGTGATG CGTTACGTTC ATCGACATTG
AACTCATTCG GTTCATATGG TGGCACGGCA AACAATAGCT GGTCTTCACA AGCAACAATT
CAGCTTAAAG GCGCAAGTGC GAGTGACACC TTAGTTTTGC TAGACGGTCA GCGTATGGCT
AAATCACCTG TTCTTGGTGG TGCTGCAGCA AACATTAATA CAATCCCAAC GTCAGCTATT
GAGCGTATCG AAATTCTATC TGATGGGGCA TCAGCTATTT ATGGTACTGA TGCGGTAGCG
GGTGTTGTAA ACGTTATTTT GAAGAAAAGC TTCGAAGGTA TCGAATTTAA AGCGCGTGCA
GAAGAAACTG AAGCTGAAGG CGGTGATAAC CACTCTTTCT CATTCACCGG TGGTTTAAAT
TCAGAAAATG GTAATCTTGT ATTTACCATG GAGCACTACA AGAAAGATAA AATCTTGATG
AGTGATCGCC CCTACACAGC TGCGCACGTG AGAGATGGCG AAGATCCAAC TGATTTCCGT
AGCTGGGTAG GCTTAAGTCA GACTGGTCGT ACATTAGATA TGGGACCAAA TGGTGGTTGG
GCATATCAAG CACCTTTTTC TAATACTGAT CGTACATGTG CTGATGTTTA TGGAGATAAC
TTCATAGGAC CATTGTCTGA CAGCAAGTAT GCTGGTGAGA CAGCATGTGC ATACAACTAT
ACCAATGCTG CTGCACTCGA TGTTGATCGT GAAAGAACCA ACACCTTGAT CAACTATGGC
TACGATATTA CTGACGATAT TAAGCTTACT GCTCGTGCTT ACTGGGCTGC AAATAAAACC
ATTGACCAAT CAGCACCCGT GCCTGGTTAT ATCTATTTTC CAGATGCAAT GCCAGCTTAT
ACAACAGCTG AAGGTTTAGA TTTAGTTGCA ACACCAGAAG ATGCACGCAT GCTATATCGT
TATGATACAG CGGGTAACCG TGTGCGCGAA AACCATGACA ACATGTATGA CATTTTGATT
GGTTTAGAAG GCACTACCGA ATACGTAGAT TGGGATTTTG CGGCAACTTA TAACCGCTAC
GATAACTTCG TATGGGGTAC CGGTTACGAA TTAAAAGGAG CGTCAACAGA TCTAGTCGGA
GCATGGGATG ATGCGACCAA TTCGTTTGTC GGTTGGGATC CGCGTGATCC AAATTCTGTA
GCGCCAAGTG GCGGTATGGC TAACTTCGAT ATGCGTCAAA CAGCCTCTTA TGCTGAGTTG
AGTGGTGGTG CTGGTTTTGA TCTGTTTGAA CTGGATTCTG GTACTGCAGC AATGTACGTT
GGTGCATCAT ACCGTGAAGA GTCGTTAGAC TCTAAAGTAG ATGCATTATC TGAAGCCGGT
TTGATAAAAG GTGCAAGTGG TGGTTCTGGT GGTGAAGGCG AACGTGATAT TAAAGCAATT
TTTGCTGAGA TGACCATTCC TCTACTTGAT AACCTAGAGC TAAACTTAGC TGCACGTTAC
GATGATTACT CTGACTTTGG TGATACGTTT AACCCTCAGG TTTCTATCCG ATATAACCTG
TTTGAACCAT TATTGCTTCG TGCATCTTGG GGAACTGGTT TTAAAGCACC AAGCTTATCG
CAGTTAAACC AGACACCAAG TGAAGGTTGG AACGACATAA CGAACTATAT GCAATGTTAT
GAGGAAACGG GTGTTGTTGA TGGTTGTACG ATTGAAAATA GCATTCCAGT TTATGTTGAT
AAGAATGAAA ACTTAGGTCC TGAAGAGTCT GAAAGCTATA ACCTAGGTAT GGTTTGGGAT
ATCACAGATA ACATCAACAT GACTGTTGAC TACTGGGTGC TTGATACTGA CAACCTAATA
GGTCAGATTG GCAATGATGA GCTAGTCTAT ACGCAAGCTA AACTCTGGGA AGCGGCCGAC
GCAATGGGCG TTGCACGTCC AGATATTTCA GTGGTTTACC CAGGGACTAG CATCTCTCAG
AACAGTTCAG GTAAGCTAAC AGAGATGGAC AATGTGCTGC AAAACTTTGG TACTGCTGAG
CGTGAAGGTA TTGATACCAA TATTGCTGCA ACATTCGAAA CTGGAGTGGG AGAGTTTAAA
CTTGGTCTCG CTTGGTCTCA CTATATTAAG TATACCGATA GTGCGCCAAT CGGTGGTGAA
CTAGTGGTAT CTCGTAACTG GGCGGGTTCA TCAGGAACAC CTGATGATCG TGTAAGCTTT
AGCACTAATT ACATTTTTGC CGATGACCAT AGCTTGTTCT ATAAAGCTGA TTACATTGAT
GGTCAAACAA CGTATGACAT CAATGATGAT GGTTCAAAGT ATGAGATAGA TTCATTGATA
TATCATACTA TTACATACTC ATACATGATG CCTTGGAACA ACTCTATCAG TATCGGTGTA
AACAACCTAA CTGATGAAGA GCCTGCATTT GAGCAAAATG GTGATTACAG TTCGAGCTTA
TATGACATTA TGGGTCGCAG CTACTGGGTT TCATTCTCTC AAAGTTTCTA A
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| Protein sequence | MKFNKVAKFI SLACGGVMAL SAPVYAAETE EDSVERIEVT GSRLKRVDME GATPVTTITA
EDMAVAGFST VGDALRSSTL NSFGSYGGTA NNSWSSQATI QLKGASASDT LVLLDGQRMA
KSPVLGGAAA NINTIPTSAI ERIEILSDGA SAIYGTDAVA GVVNVILKKS FEGIEFKARA
EETEAEGGDN HSFSFTGGLN SENGNLVFTM EHYKKDKILM SDRPYTAAHV RDGEDPTDFR
SWVGLSQTGR TLDMGPNGGW AYQAPFSNTD RTCADVYGDN FIGPLSDSKY AGETACAYNY
TNAAALDVDR ERTNTLINYG YDITDDIKLT ARAYWAANKT IDQSAPVPGY IYFPDAMPAY
TTAEGLDLVA TPEDARMLYR YDTAGNRVRE NHDNMYDILI GLEGTTEYVD WDFAATYNRY
DNFVWGTGYE LKGASTDLVG AWDDATNSFV GWDPRDPNSV APSGGMANFD MRQTASYAEL
SGGAGFDLFE LDSGTAAMYV GASYREESLD SKVDALSEAG LIKGASGGSG GEGERDIKAI
FAEMTIPLLD NLELNLAARY DDYSDFGDTF NPQVSIRYNL FEPLLLRASW GTGFKAPSLS
QLNQTPSEGW NDITNYMQCY EETGVVDGCT IENSIPVYVD KNENLGPEES ESYNLGMVWD
ITDNINMTVD YWVLDTDNLI GQIGNDELVY TQAKLWEAAD AMGVARPDIS VVYPGTSISQ
NSSGKLTEMD NVLQNFGTAE REGIDTNIAA TFETGVGEFK LGLAWSHYIK YTDSAPIGGE
LVVSRNWAGS SGTPDDRVSF STNYIFADDH SLFYKADYID GQTTYDINDD GSKYEIDSLI
YHTITYSYMM PWNNSISIGV NNLTDEEPAF EQNGDYSSSL YDIMGRSYWV SFSQSF
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