Gene Spea_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0380 
Symbol 
ID5660780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp459448 
End bp460362 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content48% 
IMG OID641234914 
Producttyrosine recombinase XerC 
Protein accessionYP_001500243 
Protein GI157960209 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGACG AAGCGTTATC GAGTAATGTG CGTTGGTTGA CTGATTTTGA GCGCTACCTG 
CGCACCGAGC GTCAAGTCTC TGCTTATACG GTGCGTAATT ATCTATTCGA GTTGAAACGC
GTCGAGAAAC TATTTAGCGA AACGGACTCT TGGCTGTCTC TGCAGCATGA GTCTTTGCAA
GCTATGCTGG CCAAATTACA CCGCAAAGGC CTCAGCCCGC GCTCACTGTC GCTGACACTT
TCCTCCTTAA AACAGTTCTA TGAGTTTTTG CTTAGAGAGC AACAGATTAA GGTTAATCCA
GCTATTAGTC TGACTGCGCC TAAGCAGGGC AAGCCCCTGC CTAAGAATAT GGATGTTGAC
TCTGTATCGC ATCTGCTAGA TCTCGATGGC GATGACCCTC TAAGTCTGCG TGATAAAGCG
ATTATGGAGC TGTTTTACTC TTCAGGACTG CGACTTGCAG AGCTTGCGGC GCTGAATGTC
GGCGATATTC AATTCTCTCA AGCACAGGTC AAAGTCTTAG GTAAAGGCAG TAAAGAGCGA
ATAGTGCCTA TCGGAAAATT AGCGTTAACG GCGATAAATC AATGGTTGGA TATCAAACGC
GATATTGCTT GTGAAGATGA CGCCTTGTTT GTTACCGCCA AAGGTAAACG CTTAGCACAC
AGAAGTATTC AGGCGCGTCT TGCAAAATGG GGTCAAGAGC AGGCTATAGG CATAAAGGTA
CACCCGCATA AGCTACGTCA CTCCTTTGCG ACCCATATGC TCGAGTCCAG TGCCGATCTT
CGCGCGGTGC AAGAGCTTTT GGGCCATGCC AATCTGTCTA CCACTCAGGT ATATACCAGC
CTAGACTTCC AACATCTTGC CAAAGTCTAT GACAATGCAC ATCCGCGAGC GAAGAAGCGA
GGCGATAAAG CATGA
 
Protein sequence
MADEALSSNV RWLTDFERYL RTERQVSAYT VRNYLFELKR VEKLFSETDS WLSLQHESLQ 
AMLAKLHRKG LSPRSLSLTL SSLKQFYEFL LREQQIKVNP AISLTAPKQG KPLPKNMDVD
SVSHLLDLDG DDPLSLRDKA IMELFYSSGL RLAELAALNV GDIQFSQAQV KVLGKGSKER
IVPIGKLALT AINQWLDIKR DIACEDDALF VTAKGKRLAH RSIQARLAKW GQEQAIGIKV
HPHKLRHSFA THMLESSADL RAVQELLGHA NLSTTQVYTS LDFQHLAKVY DNAHPRAKKR
GDKA