| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0377 |
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| Symbol | |
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| ID | 5660777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 456668 |
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| End bp | 457912 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641234911 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001500240 |
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| Protein GI | 157960206 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATCATT TTTTATATCA GGCAGATGAA CTCTACGCGG AGCAGTGTCA AGTTGCTGAG
CTTGCAAAGC AGCACGGAAC ACCGCTTTAT ATCTATTCTC GTGCGACACT AGAGCGCCAT
TGGCGTGCAT TTGATAATGC GGTGAGCGAG CATCCACATC TTATCTGCTA TGCGGTGAAG
GCTAACTCAA ACATTGCAGT GCTAAACGTA CTGGCACGTT TAGGCAGTGG CTTCGATATT
GTCTCGGGCG GTGAGCTGTC TCGTGTGATT GAAGCCGGCG GCGATCCTAC TAAAGTGGTT
TTCTCTGGCG TGGGCAAAAC TGTCAGTGAG ATGGAGATGG CACTTAACCT AGGCATCTAT
TGCTTTAATG TTGAGTCGGC AGCTGAGCTT GAGCAGCTTA ACCTTGTGGC CTTGCGCCTA
GGTAAAGTGG CGCCGGTATC GCTACGCATA AACCCTGATG TAGACGCGGG TACTCATCCC
TATATTTCGA CTGGCCTGAA AGAGAATAAA TTTGGTATCG CGATGGAAGA GGCGGAAGCT
ATCTTTGCTC GTGCTAACGA ATTGCCGGGT CTTGCGGTAA AAGGCGTCGA TTGTCATATT
GGTTCTCAAT TAACTGAGAT TAAGCCTTTC TTAGATGCCA TGGATCGCAT GTTGGCGCTA
ATCGATCGTT TAGCAGAGCA AGGCATCGAG ATTAAGCATT TCGATGTGGG CGGTGGACTC
GGAGTGACTT ACGATGACGA GCAACCACCT CAACCAGATG TATACGCAGC AGCGCTACTT
GAGCGTCTTG GCGATCGCGA TCTCAAGTTG ATCTTTGAAC CTGGCAGAGC GATTGCGGCG
AATGCCGGGA TTTTCGTCAC CCAAGTGCTA TATCTGAAAG AAAACAGCGA TAAGCGTTTT
GCTTTAGTCG ACGGCGCAAT GAATGACTTG ATCCGTCCAT CACTTTACAG CGCTTGGCAG
AAGATCGTTC CGGTTATTGA ACGTGCGGGT GAAAGCCACA GTTATGACGT TGTCGGCCCA
GTTTGCGAAA CGGGAGACTT CTTAGGTAAA GACCGTCAGC TTAACGTTCA GGAGGGCGAC
TACCTTGCGG TGCGTTCATC GGGCGCCTAT GGCTTTACCA TGGCGTCTAA TTATAATTCA
CGTCCACGTG CTGCAGAGCT GATGGTGGAT GGTGATAAAG CCTATGTCAT TCGAGAGCGA
GAAAAAGTCG CTCAATTATG GCAAGGCGAG CAGATCCTGC CGTAA
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| Protein sequence | MDHFLYQADE LYAEQCQVAE LAKQHGTPLY IYSRATLERH WRAFDNAVSE HPHLICYAVK
ANSNIAVLNV LARLGSGFDI VSGGELSRVI EAGGDPTKVV FSGVGKTVSE MEMALNLGIY
CFNVESAAEL EQLNLVALRL GKVAPVSLRI NPDVDAGTHP YISTGLKENK FGIAMEEAEA
IFARANELPG LAVKGVDCHI GSQLTEIKPF LDAMDRMLAL IDRLAEQGIE IKHFDVGGGL
GVTYDDEQPP QPDVYAAALL ERLGDRDLKL IFEPGRAIAA NAGIFVTQVL YLKENSDKRF
ALVDGAMNDL IRPSLYSAWQ KIVPVIERAG ESHSYDVVGP VCETGDFLGK DRQLNVQEGD
YLAVRSSGAY GFTMASNYNS RPRAAELMVD GDKAYVIRER EKVAQLWQGE QILP
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