Gene Spea_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0330 
Symbol 
ID5660730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp369186 
End bp370091 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content44% 
IMG OID641234860 
Productputative acyltransferase 
Protein accessionYP_001500193 
Protein GI157960159 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGCGA TAGTGTCACG CATTAGGGGA AGTTTCGCCT TTTTCTGTTA TTTTATTAAC 
ACCCTATTTT GGGTGACTCC CATATTAGTA ATGAGTATTT TCAAACTCAT TCCTTTAGCT
TGGACTCGCA AGGCTTGCAC CTACTTTCTC GATTTTTGTG CCAGTGCCTG GATCAGCGTC
AACGGGGTTA TCGAAAACTT GCTGCATCCA TTCAAGCTCA CTGTTGAAGG TGACACCCAG
CTGTCTACCA AAGAGTGGTA TATGGTTATT GCTAACCACC AGTCTTGGGT AGATATTCTT
ATCTTGCAGC GTATTTTAAA TCGCAAGATC CCCTTCTTAA AATTCTTCTT AAAGCAGGAG
CTGATCTTCG TTCCTGTGCT TGGACTTGCC TGGTGGGCGC TCGACTTTCC ATTTATGCGT
CGCTATAGCA CGGCGCAATT AAAGAAAAAC CCTAAGCTAC GCGGTAAAGA TATCGAGATC
ACTCGTAAGG CTTGTGCCAA ATTCAAGAAC AAACCCGTCA GTGTAATGAA CTTTGTTGAG
GGCACCCGCT TCCACCCGGG TAAACATAGT AAGCAAAACT CTCCCTTCAA CCACCTACTC
AAGCCTAAAG CGGGCGGCAT GGCGTTTGCG CTATCGGCTA TGGGTGAGCA TATTGATAAA
TTAGTGGACG TTTCTATCTA CTATCCCGGT AAGATCCCGA CCTACTGGGA GTTCATTAGT
GGCCAAGTCA AAGAAGTTCG AGTTCATATA ACGGTGAATA ACATTAGTGA TGAACTACGC
GGAGATTACA GCAAAGACCG CCAATTCAAA ATACAATTCC AGCAAGAGTT AAACCTTATC
TGGCAACAAA AAGATCAGGT ACTAGCCCAA TTAGCACAAG CAGAAAAAAC CCGAGAAGAG
GCATAA
 
Protein sequence
MGAIVSRIRG SFAFFCYFIN TLFWVTPILV MSIFKLIPLA WTRKACTYFL DFCASAWISV 
NGVIENLLHP FKLTVEGDTQ LSTKEWYMVI ANHQSWVDIL ILQRILNRKI PFLKFFLKQE
LIFVPVLGLA WWALDFPFMR RYSTAQLKKN PKLRGKDIEI TRKACAKFKN KPVSVMNFVE
GTRFHPGKHS KQNSPFNHLL KPKAGGMAFA LSAMGEHIDK LVDVSIYYPG KIPTYWEFIS
GQVKEVRVHI TVNNISDELR GDYSKDRQFK IQFQQELNLI WQQKDQVLAQ LAQAEKTREE
A