Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0330 |
Symbol | |
ID | 5660730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 369186 |
End bp | 370091 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641234860 |
Product | putative acyltransferase |
Protein accession | YP_001500193 |
Protein GI | 157960159 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTGCGA TAGTGTCACG CATTAGGGGA AGTTTCGCCT TTTTCTGTTA TTTTATTAAC ACCCTATTTT GGGTGACTCC CATATTAGTA ATGAGTATTT TCAAACTCAT TCCTTTAGCT TGGACTCGCA AGGCTTGCAC CTACTTTCTC GATTTTTGTG CCAGTGCCTG GATCAGCGTC AACGGGGTTA TCGAAAACTT GCTGCATCCA TTCAAGCTCA CTGTTGAAGG TGACACCCAG CTGTCTACCA AAGAGTGGTA TATGGTTATT GCTAACCACC AGTCTTGGGT AGATATTCTT ATCTTGCAGC GTATTTTAAA TCGCAAGATC CCCTTCTTAA AATTCTTCTT AAAGCAGGAG CTGATCTTCG TTCCTGTGCT TGGACTTGCC TGGTGGGCGC TCGACTTTCC ATTTATGCGT CGCTATAGCA CGGCGCAATT AAAGAAAAAC CCTAAGCTAC GCGGTAAAGA TATCGAGATC ACTCGTAAGG CTTGTGCCAA ATTCAAGAAC AAACCCGTCA GTGTAATGAA CTTTGTTGAG GGCACCCGCT TCCACCCGGG TAAACATAGT AAGCAAAACT CTCCCTTCAA CCACCTACTC AAGCCTAAAG CGGGCGGCAT GGCGTTTGCG CTATCGGCTA TGGGTGAGCA TATTGATAAA TTAGTGGACG TTTCTATCTA CTATCCCGGT AAGATCCCGA CCTACTGGGA GTTCATTAGT GGCCAAGTCA AAGAAGTTCG AGTTCATATA ACGGTGAATA ACATTAGTGA TGAACTACGC GGAGATTACA GCAAAGACCG CCAATTCAAA ATACAATTCC AGCAAGAGTT AAACCTTATC TGGCAACAAA AAGATCAGGT ACTAGCCCAA TTAGCACAAG CAGAAAAAAC CCGAGAAGAG GCATAA
|
Protein sequence | MGAIVSRIRG SFAFFCYFIN TLFWVTPILV MSIFKLIPLA WTRKACTYFL DFCASAWISV NGVIENLLHP FKLTVEGDTQ LSTKEWYMVI ANHQSWVDIL ILQRILNRKI PFLKFFLKQE LIFVPVLGLA WWALDFPFMR RYSTAQLKKN PKLRGKDIEI TRKACAKFKN KPVSVMNFVE GTRFHPGKHS KQNSPFNHLL KPKAGGMAFA LSAMGEHIDK LVDVSIYYPG KIPTYWEFIS GQVKEVRVHI TVNNISDELR GDYSKDRQFK IQFQQELNLI WQQKDQVLAQ LAQAEKTREE A
|
| |