Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0314 |
Symbol | |
ID | 5660714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 351180 |
End bp | 352661 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641234844 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_001500177 |
Protein GI | 157960143 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCGGTA ATTGTCTGGT ACTCATTCCG CTTCTGTTGA CGCTGACTTT GGCTCTGTTA CTGCGCAGAA CCTTGGTCGC CTTAGGTGTG GGGATCATCT CAGGTGCACT GATCTTAACC GAATTCAGCT TAACCCAGTC TGCCGTATAT ATGGCTGATA AAGCCTGGCT GCAATTTTAT CGCGATGGAC AATGGCAGGC TTGGCACTTA AATGTGCTAG CGGCCATGAT GTTATTAGGA ATGATGACCC AAGTATTGGC TCGAGGAGGT GCGGTTAAGC TATTTGCCGA TTGGTTATAT CACCGGATTA ACAGTGGCCG TCAGGCACGG ATCGGCGTCG TGCTGCTTGG CTGGGTAGTT TTTATCGATG GAATATTTAG TTGCTTAGCC GTGGGTCATG TTTGTCAGCC TTTAAGTCAA AGATACAAGA TGCCACCTGA GCAAATTGCC TATCTGGTTG ATTCCAATGC TTCGCCTCTA TGTGCCTTAT TACCATTTTC GAGCTGGGGA CCCTATGTGA TGGCTATCTT GGCCGGGATC ACTCTATTGC CCCTCACGCC GTTAGAATCT TTTATTGAAA TGGCAAAGTT AAACTTTTAT GCGGTCACCG TGGTGTTGCT ATCTTTGCTA GTAGCCTGGT TTGGAATTGG TTTTACTTCT GACTCAGCCC CTTTGCAAAG TAGTGAGCGA GTGGATTCTG GTAACCCTTG GCTACTAGGG TTACCCATGG TTAGCTTGCT GTTAGCTTCC ATAGGGTTAA CCTTGTATTC GGGGGCGAGC AATGCTCAGG GATCTAGCCT CAGTGATTGG ATCTCAGCAG CCGATATTGG TGCCGCCATG CGCAATGCCT GCCTAATTGC TATCTCACTT GCTCTGTTGA TGCTAAAGGT TAGTGGCCGC AGTATGTGGT TATTATTGGC CGATCTCCTA TCAGGAGTGC GCTCAATGAG TTTCGCAATC TCCATCTTAC TCTTCACCTG GATGATAGGG GCGGTGATAG CCGATCTTGG GGTGGCTAAG TTGCTCGCAG GATGGGCAGA GCAATTTCTC TCGAAAGAGG TGTTAATTGC AGGTACCTTT TTGTTGTGCG CGATGATGGC GTTTACCACA GGTTCGAGCT GGGGAACGTT CGCGATTATG ATCCCAATCG GGGCTGAAGT GGCATTAACC TTAGACCAAG CTTTGTTATT ACCCGCACTC AGTGCTGTGA TGGCGGGCTC AGTATTTGGC GATCACTGTT CACCGATCTC CGATACCAGC GTGATCAGTG CGACCAGTTC AGGCTGTGCG CCCCATGACC ACGTCATTAC TCAGCTGCCC TTTGCTATTA TTGCCGCCTT GAGTTCAGTG CTAGGTTTTC AACTGATTAA CCTCGACGTC TCCATATTTT GGGCTTGGCT GGCGGTGATA ATTGTTGCGC TCACTTTGTT AGGGGCTTAT CAAAAATTCA TTCAAAATGA GCGTTTATCC CTATCAGTAT AA
|
Protein sequence | MFGNCLVLIP LLLTLTLALL LRRTLVALGV GIISGALILT EFSLTQSAVY MADKAWLQFY RDGQWQAWHL NVLAAMMLLG MMTQVLARGG AVKLFADWLY HRINSGRQAR IGVVLLGWVV FIDGIFSCLA VGHVCQPLSQ RYKMPPEQIA YLVDSNASPL CALLPFSSWG PYVMAILAGI TLLPLTPLES FIEMAKLNFY AVTVVLLSLL VAWFGIGFTS DSAPLQSSER VDSGNPWLLG LPMVSLLLAS IGLTLYSGAS NAQGSSLSDW ISAADIGAAM RNACLIAISL ALLMLKVSGR SMWLLLADLL SGVRSMSFAI SILLFTWMIG AVIADLGVAK LLAGWAEQFL SKEVLIAGTF LLCAMMAFTT GSSWGTFAIM IPIGAEVALT LDQALLLPAL SAVMAGSVFG DHCSPISDTS VISATSSGCA PHDHVITQLP FAIIAALSSV LGFQLINLDV SIFWAWLAVI IVALTLLGAY QKFIQNERLS LSV
|
| |