| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0266 |
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| Symbol | |
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| ID | 5660666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 299132 |
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| End bp | 300001 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641234796 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001500129 |
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| Protein GI | 157960095 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATT GGGAAGGTGT GAGTGAGTTC GTTGCCGTCG CAGAAGCCGA AAGCTTTACC
AAGGCATCGC AACGGTTAGG GATCTCGACT GCGCAGGTTA GTCGGCAGAT AAGTGCATTA
GAAACACGCT TAGCCTCTAA ACTGTTTCAT CGCACCACCA GAAAGGTATC TGTTACCGAA
GTGGGTCGGG TCTATTATCA GCATTGTAGA CAGGTACTCG ATGGCCTCGA AGAAGCCGAG
CGCGCCATTA CTAACTTACA AACTACCCCA AGAGGCCTGT TAAAGATCAC TGCGCCTGTA
ACCTATGGTG AAAAAACCAT TGCTCCACTA ATTAATGACT TTGCATCGCT GTATCCTGAG
CTTGAAGTCA AACTCAATCT AAGCAATCAG AAGTTAGACC TAGTCGATGA GGGCTATGAT
CTGGCGATCC GCCTTGGCCA TTTAGAAGAT TCAAGCATGA TGGCTAAGAA GCTCAGCAGC
CGAACTCAAT ATGTGTGTGC CTCGCCAAAC TACTTAGCAA CTTATGGTTT ACCCCATTCA
CTATCTGAAC TTGATCAGCA TAACTGTTTA ATTGGCACCA TGGACTATTG GCGCTTTCAA
GAGAGCGGTA AAACCAGGAA TGTACGGGTT AAAGGCAGCT TGAGTTGCAA CAGTGGCCAT
GCCCTGGTTG ATGCAGCCAT TAAAGGCATA GGCATAGTGC AGCTGCCCGA TTATTACGTA
TTACCCTTTA TTGAATCGGG TGAGCTAACC CCCTTGCTCG AGCAAAACCG CCAACCCGAA
GAAGGGATCT GGGCGCTGTA CCCACAAAAT CGCCACCTTT CGCCTAAGGT ACGCATGCTG
CTGGATTTCC TGAGTGAAGG CCTAAAATAG
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| Protein sequence | MFNWEGVSEF VAVAEAESFT KASQRLGIST AQVSRQISAL ETRLASKLFH RTTRKVSVTE
VGRVYYQHCR QVLDGLEEAE RAITNLQTTP RGLLKITAPV TYGEKTIAPL INDFASLYPE
LEVKLNLSNQ KLDLVDEGYD LAIRLGHLED SSMMAKKLSS RTQYVCASPN YLATYGLPHS
LSELDQHNCL IGTMDYWRFQ ESGKTRNVRV KGSLSCNSGH ALVDAAIKGI GIVQLPDYYV
LPFIESGELT PLLEQNRQPE EGIWALYPQN RHLSPKVRML LDFLSEGLK
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