Gene Spea_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0244 
Symbol 
ID5660644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp274371 
End bp275045 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content47% 
IMG OID641234773 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001500107 
Protein GI157960073 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCCAT TTTTGATTGC TCCTTCTATT TTATCTGCCG ATTTTGCTCG TTTAGGTGAA 
GATGTCGATG CGGTATTAGC CGCAGGGGCA GATGTAGTTC ATTTTGATGT CATGGACAAT 
CATTATGTGC CAAATCTAAC AATTGGCCCT ATGGTATGCC AGGCGCTACG CAACTACGGT 
GTCACAGCCG ATATCGACGT GCACCTAATG GTGAAGCCAG TCGACCGCAT CATTCCTGAT 
TTTGCTGAGG CGGGTGCATC GATTATTACG TTCCATCCAG AAGCCTCTGA GCATGTGGAC 
CGCACGCTGC AGCTGATTAA AGAGTCTGGC TGTAAAGCGG GCCTAGTATT TAACCCAGCA 
ACGCCTCTTC ATTACCTAGA CCATGTAATG GATAAACTAG ACGTGATTTT GCTTATGTCA 
GTAAACCCAG GTTTTGGTGG CCAATCATTT ATTCCGACTA CTTTGGATAA ATTGCGTCAA 
GTGCGTAAGT TGATTGATGA CAGCGGTTAC GACATTCGCT TACAAGTTGA TGGCGGTGTA 
AAGGTCGATA ATATTGGCGA AATCGCAGCT GCGGGGGCGG ACATGTTTGT TGCAGGTTCA 
GCTATTTTCA ATAAGCCTGA TTACAAGGCG GTAATCGACG AGATGCGTGC AGAACTTGCA 
AGCGTTGAGG CGTAA
 
Protein sequence
MRPFLIAPSI LSADFARLGE DVDAVLAAGA DVVHFDVMDN HYVPNLTIGP MVCQALRNYG 
VTADIDVHLM VKPVDRIIPD FAEAGASIIT FHPEASEHVD RTLQLIKESG CKAGLVFNPA 
TPLHYLDHVM DKLDVILLMS VNPGFGGQSF IPTTLDKLRQ VRKLIDDSGY DIRLQVDGGV 
KVDNIGEIAA AGADMFVAGS AIFNKPDYKA VIDEMRAELA SVEA