Gene Spea_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0239 
SymbolaroB 
ID5660639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp269970 
End bp271049 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content45% 
IMG OID641234768 
Product3-dehydroquinate synthase 
Protein accessionYP_001500102 
Protein GI157960068 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.55339e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAC AGGTTCTGGT TGAGCTCGGA GAGCGTAGTT ACCCAATTGA AATTGGCCAG 
AATTTGTTTA GTAGTAGCGA GCCATTGGCT CGCTATCTTC AAAATAAAAA CATACTAATC
GTCACCAACG AAACGATAGC GCCTCTCTAT CTTCAACAGA TAGAAGCTAT GCTGTCGGAT
TTCGCGTGCG TCAAACCCGT CATTCTTCCC GACGGTGAAC AGTACAAAAC GCTTGAACAG
ATGAATACGA TATTCACTTC ATTGCTAGAA CAGAATCTAG GTAGAGATAC GGTTTTGATT
GCTCTAGGCG GTGGTGTGAT TGGCGATATG ACAGGTTTTG CTGCAGCGAG CTACCAGCGT
GGTGTGGATT TTATTCAGAT CCCCACGACC TTGTTGTCTC AAGTGGATTC CTCTGTTGGT
GGTAAAACCG CAGTTAATCA TCCACTAGGT AAAAATATGA TAGGCGCCTT CTATCAACCT
AAGTGTGTAT TAATTGACAC CCATTGCCTA AGCACTTTAC CTAAGCGCGA GTTTGCTGCG
GGAATGGCTG AGGTGATCAA GTACGGTGTT ATTTGGGATG CCGAGTTTTT CCAATGGCTT
GAAAACAACG TTGAAGCGTT GAAATCATTA GATACACAAG CGCTCGAATA TGCAATTAGC
CGTTGCTGTG AAATTAAGGC CGAAGTCGTA GAGAAGGACG AAACCGAACA AGCTGTGCGT
GCATTGCTTA ATTTGGGACA TACCTTTGGC CACGCAATAG AAGCTGAAAT GGGCTACGGT
GTTTGGCTGC ACGGTGAAGC TGTCTCTGCT GGCACAGTCC TTGCTGCAAT AACCTCAAAT
AAGCTTGGGT TAGTTGATGA GTCAATTGTT TGTCGTATAA CAGCGTTATT AGCGGCATTT
GATCTGCCTA CAACTGCTCC CGACACAATG GATTTTGAGC AATTCATTAA GCATATGCGC
CGCGACAAGA AGGTGCTCAA AGGTCAGTTA CGACTCATTT TACCTGAAGG CATAGGCCAA
GCAGGGATCT ACAGTGACGT TACCGATGAG CTGCTGGAAG AGGTTATCAG CTGCGCATAA
 
Protein sequence
MAKQVLVELG ERSYPIEIGQ NLFSSSEPLA RYLQNKNILI VTNETIAPLY LQQIEAMLSD 
FACVKPVILP DGEQYKTLEQ MNTIFTSLLE QNLGRDTVLI ALGGGVIGDM TGFAAASYQR
GVDFIQIPTT LLSQVDSSVG GKTAVNHPLG KNMIGAFYQP KCVLIDTHCL STLPKREFAA
GMAEVIKYGV IWDAEFFQWL ENNVEALKSL DTQALEYAIS RCCEIKAEVV EKDETEQAVR
ALLNLGHTFG HAIEAEMGYG VWLHGEAVSA GTVLAAITSN KLGLVDESIV CRITALLAAF
DLPTTAPDTM DFEQFIKHMR RDKKVLKGQL RLILPEGIGQ AGIYSDVTDE LLEEVISCA