Gene Spea_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0238 
SymbolaroK 
ID5660638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp269451 
End bp269966 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content45% 
IMG OID641234767 
Productshikimate kinase I 
Protein accessionYP_001500101 
Protein GI157960067 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.34252e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGA AACGTAATAT TTTCCTAGTA GGCCCTATGG GGGCTGGTAA AAGCACTATA 
GGCCGTCATC TGGCACAGAT GCTGCACTTA GAGTTCCACG ATTCAGATCA AGAAATTGAA
AGCCGCACAG GAGCTGATAT CGCTTGGGTT TTTGATGTTG AAGGTGAAGA GGGTTTCCGC
ATTCGTGAAA CACAAGTTGT CGCTGATCTG ACAGAAAAAC AAGGTATTGT CCTAGCAACA
GGCGGTGGTT CGATTCAAAG CAAAGAGATC CGTAATAATC TTTCTGCACG CGGCATCGTT
GTTTACCTAG AAACTACTAT CGATAAGCAA GTCGCGCGTA CGCAAAGAGA TAAGCGTCGT
CCATTGCTAC AGGTTGACGA CCCAAGAGAA GTGCTAGAGA GTCTAGCCGA GGTACGCAAT
CCTCTTTACG AAGAGATTGC AGACGTCATC GTTAAGACTG ACGAACAAAG TGCCAAAGTT
GTTGCAAATC AAATTATCGA ACAGTTAGGT TTTTAA
 
Protein sequence
MAEKRNIFLV GPMGAGKSTI GRHLAQMLHL EFHDSDQEIE SRTGADIAWV FDVEGEEGFR 
IRETQVVADL TEKQGIVLAT GGGSIQSKEI RNNLSARGIV VYLETTIDKQ VARTQRDKRR
PLLQVDDPRE VLESLAEVRN PLYEEIADVI VKTDEQSAKV VANQIIEQLG F