Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0216 |
Symbol | |
ID | 5660616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 228156 |
End bp | 228449 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641234737 |
Product | cytochrome c class I |
Protein accession | YP_001500079 |
Protein GI | 157960045 |
COG category | [C] Energy production and conversion |
COG ID | [COG3245] Cytochrome c5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0309264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TATTAGCACT GACTGCAGTG GCAGCTATGA CTCTGTCTAC AAGCGCACTT GCTCAAGATG GTAAAGCTGT ATATGACAAG GCATGCCAAG TATGTCACAG CATGGGTGTT GCTGGTGCGC CAAAATCACA TGACGCTGCA GCTTGGGAAC CACGTCTAGG TAAAGGTATG GACGCTTTAG TATCTTCTGT TAAGTCAGGC CTAAACGCTA TGCCACCAGG TGGTATGTGT ACAGATTGCT CTGATGATGA TTACAAGAAT GCAATCGAGT ATATGTCTAA GTAA
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Protein sequence | MKKLLALTAV AAMTLSTSAL AQDGKAVYDK ACQVCHSMGV AGAPKSHDAA AWEPRLGKGM DALVSSVKSG LNAMPPGGMC TDCSDDDYKN AIEYMSK
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