Gene Spea_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0204 
SymbolsecY 
ID5660605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp219584 
End bp220924 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content44% 
IMG OID641234726 
Productpreprotein translocase subunit SecY 
Protein accessionYP_001500068 
Protein GI157960034 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0201] Preprotein translocase subunit SecY 
TIGRFAM ID[TIGR00967] preprotein translocase, SecY subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.62692e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAC CAGGACTTGA TTTAAAAAGC GCGAAGGGCG GTTTATCAGA ATTGAAAACC 
CGCCTGCTGT TCGTGATTGG TGCAATTATC GTCTTTAGAG CCGGTTCGTT TGTACCAATT
CCTGGTATTG ACGCTGCTGT ACTAGCAGAG CTGTTTAATC AGCAAAAGGG GACCATCCTA
GGCATGTTTA ACATGTTCTC TGGTGGTGCC CTTGAACGTG CCTCTATCTT CGCATTAGGT
ATCATGCCGT ATATTTCGGC ATCTATCATT ATGCAGTTGT TGACTGTGGT TCATCCCGCA
CTTGCTGAAT TGAAAAAAGA AGGCGAGTCA GGACGAAAGA AGATCAGTCA ATATACTCGA
TACGGCACAT TGGTCCTGGG TACGTTCCAG GCAATCGGTA TCGCAACAGG TTTACCGAAT
CTAGTTCCAG GGTTAGTTGT TAACCTAGGA TTTAGTTTCT ACTTCGTTGC AGTTGTGAGC
TTAGTAACAG GAACTATGTT CCTAATGTGG CTAGGTGAGC AAATTACCGA AAGAGGCATA
GGTAATGGTA TCTCGATTCT TATTTTCGCA GGTATTGTTG CTGGTCTGCC ATCTGCTATC
GGCCAAACAG CCGAGCAGGC GCGTCAAGGC GACTTGAATG TACTAGTATT GTTGTTGCTG
GCAGTGATTG TTTTCGCTGT TACTTATTTT GTGGTATTCG TTGAGCGTGG ACAACGTCGT
ATCGTTGTTA ACTATGCTAA GCGTCAGCAG GGCCGTAAGG TTTTTGCAGC GCAAAGCACT
CACTTACCAC TTAAGATTAA TATGGCCGGT GTTATCCCGC CTATTTTTGC GTCCAGCATC
ATTTTGTTCC CAGGCACACT GGCTCAGTGG TTTGGTCAAA ATGAGTCCAT GTCATGGTTA
AGTGATTTTT CACTAGCTGT GTCACCAGGA CAACCGCTGT ACTCATTATT ATATGCAACA
GCGATTATTT TCTTCTGTTT CTTCTATACT GCGTTGGTGT TTAACCCTCG CGAAACAGCT
GATAACTTGA AGAAGAGTGG TGCGTTTATT CCCGGGATTC GTCCTGGAGA ACAGACTTCG
CGTTACATTG ATAAAGTTAT GACACGCCTA ACATTAGCTG GCGCGTTATA TATTACCTTT
ATCTGCTTAA TTCCGGAGTT CATGTTAATT GCGTGGAAAG TACAGTTCTA TTTTGGCGGT
ACTTCACTAC TAATTATGGT AGTCGTAATC ATGGACTTCA TGGCTCAGGT TCAGACCCAT
ATGATGTCTC ATCAGTATGA GTCTGTAATG AAGAAAGCTA ACTTGGTAAA CAAAGCGAAC
TTAGATCGCT TTGGTCGCTA A
 
Protein sequence
MAKPGLDLKS AKGGLSELKT RLLFVIGAII VFRAGSFVPI PGIDAAVLAE LFNQQKGTIL 
GMFNMFSGGA LERASIFALG IMPYISASII MQLLTVVHPA LAELKKEGES GRKKISQYTR
YGTLVLGTFQ AIGIATGLPN LVPGLVVNLG FSFYFVAVVS LVTGTMFLMW LGEQITERGI
GNGISILIFA GIVAGLPSAI GQTAEQARQG DLNVLVLLLL AVIVFAVTYF VVFVERGQRR
IVVNYAKRQQ GRKVFAAQST HLPLKINMAG VIPPIFASSI ILFPGTLAQW FGQNESMSWL
SDFSLAVSPG QPLYSLLYAT AIIFFCFFYT ALVFNPRETA DNLKKSGAFI PGIRPGEQTS
RYIDKVMTRL TLAGALYITF ICLIPEFMLI AWKVQFYFGG TSLLIMVVVI MDFMAQVQTH
MMSHQYESVM KKANLVNKAN LDRFGR