| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0204 |
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| Symbol | secY |
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| ID | 5660605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 219584 |
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| End bp | 220924 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641234726 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001500068 |
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| Protein GI | 157960034 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000662692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC CAGGACTTGA TTTAAAAAGC GCGAAGGGCG GTTTATCAGA ATTGAAAACC
CGCCTGCTGT TCGTGATTGG TGCAATTATC GTCTTTAGAG CCGGTTCGTT TGTACCAATT
CCTGGTATTG ACGCTGCTGT ACTAGCAGAG CTGTTTAATC AGCAAAAGGG GACCATCCTA
GGCATGTTTA ACATGTTCTC TGGTGGTGCC CTTGAACGTG CCTCTATCTT CGCATTAGGT
ATCATGCCGT ATATTTCGGC ATCTATCATT ATGCAGTTGT TGACTGTGGT TCATCCCGCA
CTTGCTGAAT TGAAAAAAGA AGGCGAGTCA GGACGAAAGA AGATCAGTCA ATATACTCGA
TACGGCACAT TGGTCCTGGG TACGTTCCAG GCAATCGGTA TCGCAACAGG TTTACCGAAT
CTAGTTCCAG GGTTAGTTGT TAACCTAGGA TTTAGTTTCT ACTTCGTTGC AGTTGTGAGC
TTAGTAACAG GAACTATGTT CCTAATGTGG CTAGGTGAGC AAATTACCGA AAGAGGCATA
GGTAATGGTA TCTCGATTCT TATTTTCGCA GGTATTGTTG CTGGTCTGCC ATCTGCTATC
GGCCAAACAG CCGAGCAGGC GCGTCAAGGC GACTTGAATG TACTAGTATT GTTGTTGCTG
GCAGTGATTG TTTTCGCTGT TACTTATTTT GTGGTATTCG TTGAGCGTGG ACAACGTCGT
ATCGTTGTTA ACTATGCTAA GCGTCAGCAG GGCCGTAAGG TTTTTGCAGC GCAAAGCACT
CACTTACCAC TTAAGATTAA TATGGCCGGT GTTATCCCGC CTATTTTTGC GTCCAGCATC
ATTTTGTTCC CAGGCACACT GGCTCAGTGG TTTGGTCAAA ATGAGTCCAT GTCATGGTTA
AGTGATTTTT CACTAGCTGT GTCACCAGGA CAACCGCTGT ACTCATTATT ATATGCAACA
GCGATTATTT TCTTCTGTTT CTTCTATACT GCGTTGGTGT TTAACCCTCG CGAAACAGCT
GATAACTTGA AGAAGAGTGG TGCGTTTATT CCCGGGATTC GTCCTGGAGA ACAGACTTCG
CGTTACATTG ATAAAGTTAT GACACGCCTA ACATTAGCTG GCGCGTTATA TATTACCTTT
ATCTGCTTAA TTCCGGAGTT CATGTTAATT GCGTGGAAAG TACAGTTCTA TTTTGGCGGT
ACTTCACTAC TAATTATGGT AGTCGTAATC ATGGACTTCA TGGCTCAGGT TCAGACCCAT
ATGATGTCTC ATCAGTATGA GTCTGTAATG AAGAAAGCTA ACTTGGTAAA CAAAGCGAAC
TTAGATCGCT TTGGTCGCTA A
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| Protein sequence | MAKPGLDLKS AKGGLSELKT RLLFVIGAII VFRAGSFVPI PGIDAAVLAE LFNQQKGTIL
GMFNMFSGGA LERASIFALG IMPYISASII MQLLTVVHPA LAELKKEGES GRKKISQYTR
YGTLVLGTFQ AIGIATGLPN LVPGLVVNLG FSFYFVAVVS LVTGTMFLMW LGEQITERGI
GNGISILIFA GIVAGLPSAI GQTAEQARQG DLNVLVLLLL AVIVFAVTYF VVFVERGQRR
IVVNYAKRQQ GRKVFAAQST HLPLKINMAG VIPPIFASSI ILFPGTLAQW FGQNESMSWL
SDFSLAVSPG QPLYSLLYAT AIIFFCFFYT ALVFNPRETA DNLKKSGAFI PGIRPGEQTS
RYIDKVMTRL TLAGALYITF ICLIPEFMLI AWKVQFYFGG TSLLIMVVVI MDFMAQVQTH
MMSHQYESVM KKANLVNKAN LDRFGR
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