Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0179 |
Symbol | rpsL |
ID | 5660580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 205696 |
End bp | 206070 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641234701 |
Product | 30S ribosomal protein S12 |
Protein accession | YP_001500043 |
Protein GI | 157960009 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00020988 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTG TAAACCAGTT GGTACGTAAG CCTCGCGCAC CGAAAGTCGA TAAGACTAAC GTTCCTGCGC TAGCTGCGTG TCCACAAAAA CGTGGTGTTT GTACTCGCGT ATACACTACT ACACCAAAAA AACCTAACTC TGCACTACGT AAAGTAGCTC GTGTGCGTCT AACTAACGGT TTCGAAGTAA CTTCGTACAT CGGCGGTGAA GGCCACAACC TGCAGGAACA CAGCGTAATT CTAATCCGTG GCGGTCGTGT AAAAGACTTA CCGGGTGTGC GTTACCACAC TGTACGCGGC GCATTAGACT GTGCTGGTGT AAGTGAGCGC CGTCAAGGCC GTTCTAAGTA CGGTGCTAAG CGTCCTAAGT CTTAA
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Protein sequence | MATVNQLVRK PRAPKVDKTN VPALAACPQK RGVCTRVYTT TPKKPNSALR KVARVRLTNG FEVTSYIGGE GHNLQEHSVI LIRGGRVKDL PGVRYHTVRG ALDCAGVSER RQGRSKYGAK RPKS
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