Gene Spea_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0168 
Symbol 
ID5660569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp189434 
End bp190396 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content46% 
IMG OID641234687 
Productbiotin--protein ligase 
Protein accessionYP_001500032 
Protein GI157959998 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00063361 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAGC AGTGGAGTCG CAAACGAGAA ATCCTCTCAG AGCTAGCATC AGGGAAATTT 
GTATCTGGGG AAGCATTGGC ATCAATTCTT GGTGTCTCTA GAACCGCAAT CAGTAATCAT
ATTGCAGCTT TAGAAGAGTA TGGTGTCGAT ATCTACAGTG TTAAGGGCAA GGGTTACCGT
CTAAATGGAA CCCTCTCTTT GGTTGATGAG AGTGTCCTTA AGGCCCGAAT TAGCAACCGA
TGCTTTTATT TCGATGAGAT CCCAAGCACT AACGCTTTTA TTTTAAAGCA TGCAGAGGAC
TTGGTATCCG GTGATATCTG TATCGCTGAA TATCAATCGG CTGGTAGGGG GCGAAGAGGG
CGCGTCTGGG TATCTCCCTA TGGTTGTCAT CTGTATTTCT CTATGTACTG GCAGTTTCCT
CAGGGAATGG CTCAGGCGAT GGGATTGAGC TTGGTGGTAG CGTGTTCAAT CGTTTCTGTT
TTGCAGCAGC TAGATGTTGA AGGCGTTGGG GTCAAATGGC CCAATGATAT CTATTTAAAT
AGTAAAAAGT TGGCTGGGGT GTTGATTGAG CTGAGTGGGC ACACTGATAG CGAATGCAAC
TTAGTCATAG GCATAGGATT GAATATGGCT ATGGGAGAAC AGCATGCTGC AAAGATCGAT
CAGCCATGGA GTGATTTAAC CGGGCTTGAG TGTGTTCCGG ATAAAACTGA ATTGCTGGTG
TTATTGCAAA GGCAGTTACA ACTTGATTTA ACCCTGTTTC AAAAGTCAGG GCTTAAGCCG
TTTCAACAGA GATGGAGCGC CGCAGATATA TTCGAAGGGC AGCCAGTTAA GTTGCTTATT
GGTAGCGATG AGATCCATGG TATTTACCGT GGCATCGACG AGCAGGGGGC GGTTGTGCTA
GAGACGGCCT CTGGAAAACA GAGTTTTATT GGCGGTGAGA TTAGCCTACG AAAGCTAGGC
TAA
 
Protein sequence
MVEQWSRKRE ILSELASGKF VSGEALASIL GVSRTAISNH IAALEEYGVD IYSVKGKGYR 
LNGTLSLVDE SVLKARISNR CFYFDEIPST NAFILKHAED LVSGDICIAE YQSAGRGRRG
RVWVSPYGCH LYFSMYWQFP QGMAQAMGLS LVVACSIVSV LQQLDVEGVG VKWPNDIYLN
SKKLAGVLIE LSGHTDSECN LVIGIGLNMA MGEQHAAKID QPWSDLTGLE CVPDKTELLV
LLQRQLQLDL TLFQKSGLKP FQQRWSAADI FEGQPVKLLI GSDEIHGIYR GIDEQGAVVL
ETASGKQSFI GGEISLRKLG