Gene Spea_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0166 
Symbol 
ID5660567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp181132 
End bp181587 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content40% 
IMG OID641234679 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_001500030 
Protein GI157959996 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.21523e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAGT CATTCTTGAT CGTATTGGCC GTAGCCATTA TTGGTGCACT CGCTATTTTT 
CAAATCGCAC CGGATCTAAA CGGCGCCATC GCTTTCTTTA CTGGTGCTAT CATCGCGAGC
GTTATTTTTT CTCTTCAATC TAAAACGCCT GCTTCTACAA CTAATAGTAA TGAACCATAT
AGCGGTCCAA CCATGACTCT ATATGTAGGT AATCTTCCTT ATCGTGTACA CGAAGGAGAA
GTAAAAGCTC TATTTGGTGA GTTTGGCCCA GTAAACTCTG TACGTTTAGT TCGTGATCGT
AAGACTGGCC GTCGTAAAGG TTTTGGATTT ATTGAAATGT CAGAAGCTGG CGCTAAGAAA
GCTATGACAA AATTGAATGA ATTCGATTTC CAAGAAAGAA CATTAAAAGT GCGTGAGGCT
AAATCTCAAG ATTCCGATAA AAGTGATAAC GCATAA
 
Protein sequence
MQKSFLIVLA VAIIGALAIF QIAPDLNGAI AFFTGAIIAS VIFSLQSKTP ASTTNSNEPY 
SGPTMTLYVG NLPYRVHEGE VKALFGEFGP VNSVRLVRDR KTGRRKGFGF IEMSEAGAKK
AMTKLNEFDF QERTLKVREA KSQDSDKSDN A