Gene Spea_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0165 
Symbol 
ID5660566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp180312 
End bp181118 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content42% 
IMG OID641234678 
Productglutamate racemase 
Protein accessionYP_001500029 
Protein GI157959995 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.22262e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTGGAC CTATTCTTAT TTTTGACTCA GGGATCGGTG GACTATCGAT TTTCGATGAG 
ATCAGAAAAG TATTACCCGA TCAAGATTGC TGCTATCTAT TCGATAATGC CCGTTTACCT
TATGGTGAGT TAGAAGAGTC GGTTCTTATT AAAGGTTGTG TAGAGCTTAT TTGCGAACAG
GCACTTAAGA TCGATGCATC ATTAGTTGTT GTTGCCTGCA ATTCGGCAAG TACTTTAGTG
CTCCCTGGTT TACGAGAAAG ATTATCTATT CCTATTGTAG GGGTTGTGCC AGCAATTAAA
CCCGCTGCAA AGTTATCTAT AGCAAGGCAT ATTGGTTTAC TGGCAACGCC AGGTACGATT
AAGCGATCCT ATACCAGAGA GTTAATTGAA CAATTTGCCG ATGGATGCAA GGTAGAGCTT
TTTGGCTCAT CTGAACTCGT GATGTTGGCT GAGGCCAAAC TTGCAGGGGA AAGCGTAGAT
TTGATTAAGC TGAGAGCTCA ACTAGAGCCT ATTCGTCAAT CGAAGTTAGA CACCCTAGTT
CTAGGATGTA CTCACTTTCC TATAATAGCG AGCGAGATGC AGCAGATCTT AGGTAATGGA
GTTAAGTTAC TCGATTCAGG AGTTGCAATC GCCCAGAGGG TCGTTTTTCT GCTTAACGAG
TTTTCGCTGG ATAAAGTCGT TGATAATAGA ACGAAGAATT TAACGGCAAT TTATACTACG
GCAGAGATAT CGGCGGGTTT AACAACCAGA CTAGCTGAAA AAGGCTTCAC TAAGATAGTG
TCACGCTCTT CAGCCAATCT AGGTTAG
 
Protein sequence
MFGPILIFDS GIGGLSIFDE IRKVLPDQDC CYLFDNARLP YGELEESVLI KGCVELICEQ 
ALKIDASLVV VACNSASTLV LPGLRERLSI PIVGVVPAIK PAAKLSIARH IGLLATPGTI
KRSYTRELIE QFADGCKVEL FGSSELVMLA EAKLAGESVD LIKLRAQLEP IRQSKLDTLV
LGCTHFPIIA SEMQQILGNG VKLLDSGVAI AQRVVFLLNE FSLDKVVDNR TKNLTAIYTT
AEISAGLTTR LAEKGFTKIV SRSSANLG