Gene Spea_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0164 
Symbol 
ID5660565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp179017 
End bp180114 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content42% 
IMG OID641234677 
ProducttRNA (uracil-5-)-methyltransferase 
Protein accessionYP_001500028 
Protein GI157959994 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.38982e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAG CAGCAATGGA TCCTACAACC TATGATGTGC AACTAGAAGC AAAGTGCGTC 
AAGTTAAAGC AGTTATTTGC TGATTTTGAT ACCCCTGAAC TGGAAACATT CAGTTCCGAA
CCTGCTCACT ACCGTATGCG TGCTGAGTTT AGAGTTTGGC ATGAAGGTGA AGACCTCTAT
TACTATATGT TTGATAAAGA GCTTAATAGT AAAGTTCGTT GTGATCAGTT CCTGCCGGCA
AGCGAATTGA TTAATAAAAT GATGCCTGCT TTAGTAGAGT TATTAAAGCC GAATACTATT
TTACGCCACC GTCTGTTCCA AATTGATTTC TTGTCCACGC TAAGCGGCGA GATTTTAGTT
TCACTGTTAT ATCACAAGCA GCTGGATAGT GAGTGGGAAC AACAGGCTAA AATCCTTAAA
CAAACTCTTA GCACCCAGTT TAACGTAAAC TTAATTGGCC GAGCGCGTAA GCAGAAGATC
ATCTTTGATA AAGACTTCGT GGTTGAGTCA CTCAATGTTG CTGGCAAACA ACTACAGTAT
CATCAGATTG AGAACAGCTT CACTCAGCCA AACGGTAAGG TGTCAGTTAA GATGCTTGAG
TGGGCTATTG ATATCACCAA GAATAGCAGT GGTGATCTAC TAGAGCTTTA TTGTGGTAAC
GGTAACTTCT CTATCGCGTT AGCACAAAAC TTTGAGCGCG TATTAGCAAC TGAACTGGCC
AAGCCTTCTG TTGAGTCAGC GCAATACAAT ATCAAAGTTA ACCAAGTCGA GAACCTGCAG
ATCATCCGTA TGTCAGCAGA AGACTTTACC GAAGCTATGG CGAAGAAGCG CAGCTTTAGA
CGCTTAGAAG GTATCGATTT AGATAGTTAT AACTGTAATA CCATTTTTGT TGACCCACCA
CGAGCTGGGC TAGATGCGGA TACGGTTAAG CTTGTGCAAG GTTATGAGCG TATCGTTTAT
ATCTCATGTA ACCCTAATAC CCTTATCGAT AACTTAGCTG AGCTGAGCAA GACCCATAAG
ATCACTCGCT TTGCCTTATT CGATCAGTTC CCTTATACGG ATCATATGGA GTCAGGGGTT
TTCCTTGAGA AAAAATAA
 
Protein sequence
MNLAAMDPTT YDVQLEAKCV KLKQLFADFD TPELETFSSE PAHYRMRAEF RVWHEGEDLY 
YYMFDKELNS KVRCDQFLPA SELINKMMPA LVELLKPNTI LRHRLFQIDF LSTLSGEILV
SLLYHKQLDS EWEQQAKILK QTLSTQFNVN LIGRARKQKI IFDKDFVVES LNVAGKQLQY
HQIENSFTQP NGKVSVKMLE WAIDITKNSS GDLLELYCGN GNFSIALAQN FERVLATELA
KPSVESAQYN IKVNQVENLQ IIRMSAEDFT EAMAKKRSFR RLEGIDLDSY NCNTIFVDPP
RAGLDADTVK LVQGYERIVY ISCNPNTLID NLAELSKTHK ITRFALFDQF PYTDHMESGV
FLEKK