Gene Spea_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0163 
Symbol 
ID5660564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp178274 
End bp178951 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content44% 
IMG OID641234676 
ProductDNA-binding transcriptional repressor FabR 
Protein accessionYP_001500027 
Protein GI157959993 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000000509997 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGTT TTGTGTTAAA AAGCGGTATT ATTCAAGGAA TAATTTTTGT AAGTAGGTTC 
AACATGGGCA TTAGAGCACA ACAAAAAGAG AAGACTCGAC GGGCACTCGT CGATGCGGCA 
TTTAGCCAGT TAAGTGCTGA GCGTAGCTTT TCTAGCCTAA GTTTGCGTGA AGTTGCACGT 
GAAGCGAACA TTGCTCCAAC GTCATTCTAT CGTCATTTTA AAGATATGAA TGAGCTGGGT 
TTAACCATGG TGGATGAAGG CGGTTTGACG CTTAGACAGT TAATGCGTAA AGGGCGTCAA 
CGTGCAGAAG CCGGTGGCAG CGTGATCCGC ATTTCGGTTG ACACTTTTAT GGAAGTACTT 
GAATCAAATC CAAACGTATT CCGTATTCTA CTGCATGAAC GTTCAGGAAC ATCGGCCCCT 
TTTAGAGGTG CAGTTGCTCG TGAAATCGAG CATTTTATTT CAGAATTGGC GCATTACACC 
GAAGCGACAG CAAATCGCTC GCCAGAATTA GCCCATGCAC AGGCTGAAGC CTTAGTAACT 
TTAGTCTTTA ATGCCGGCGC TGCTGCATTA GATATGAAGC GAGTGGATCG AAAAGTATTG 
GCTGACCGCT TGGTGATTCA ATTGCATATG ATTGCTAAGG GTGCTGATGC ACTACAAAAC 
AAGAAAGAAC AAAATTAA
 
Protein sequence
MLRFVLKSGI IQGIIFVSRF NMGIRAQQKE KTRRALVDAA FSQLSAERSF SSLSLREVAR 
EANIAPTSFY RHFKDMNELG LTMVDEGGLT LRQLMRKGRQ RAEAGGSVIR ISVDTFMEVL 
ESNPNVFRIL LHERSGTSAP FRGAVAREIE HFISELAHYT EATANRSPEL AHAQAEALVT 
LVFNAGAAAL DMKRVDRKVL ADRLVIQLHM IAKGADALQN KKEQN