Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0161 |
Symbol | |
ID | 5660562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 175860 |
End bp | 176900 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641234674 |
Product | selenophosphate synthetase |
Protein accession | YP_001500025 |
Protein GI | 157959991 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0709] Selenophosphate synthase |
TIGRFAM ID | [TIGR00476] selenium donor protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0280932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATT CAGAAATCAA ACTTACCGAG TACAGTCACG GCGCGGGTTG CGGCTGCAAA ATTTCTCCAA AAGTTCTCGG CACTATACTT GCCACTCAGC TGCCTGTATT TGATGACCCT AATCTACTGG TAGGTAACCA GACTCGCGAT GATGCAGCCG TCTATAAGCT TAACGAGACC ACGGGCATTA TCAGCACCAC CGACTTCTTC ATGCCGATTG TAGATGACCC ATTTACCTTT GGACGTATTG CTGCAACTAA CGCCATTAGT GATATCTATG CCATGGGTGG TACACCTATG ATGGCCATTG CGATTCTAGG CTGGCCAGTG AATAAATTGC CTGCAGAAGT CGCTCAGCAA GTCGTTGACG GTGGCCGCAA AGCCTGTGCC GACGCAGGTA TTATGCTCGC AGGTGGTCAT AGCATTGACT CGCCAGAACC AATATTTGGT TTAGCCGTAA CCGGCCAGAT CCCATTAGAT GAGTTAAAGC AAAACGATAC CGCTAAAGCG GGCGATAAGC TTTATCTAAC TAAGCCACTC GGTATTGGTA TTTTGACTAC GGCGCAAAAG CAGAAAAAGT TGGCTGATGC CGATCTTAAC ACTGCGGCCG AAGCCATGTG CCAGCTTAAT GTATTAGGCC CTAAAATTGC CAAGATCTCT CAAGTTAATG CACTAACCGA TGTAACAGGT TTCGGTTTAG CCGGACATCT ACTTGAGATG TGCCACGGTG CAGACTTAAG TGCAAAACTA GATATTAGCT TACTGCCTTT GCTACCGAAT GCCCGCCACT ACTTGCAGTT GGGCTGTATT CCTGGTGGTA CCCATAGAAA CTTCGATAGC TACGGTGAAC ACCTACCTGA ATTAACTGAA GAACAGAAGG CCATTATTTG CGACCCACAA ACTAGTGGCG GATTATTGAT AGCCGTTGCT ACCGACAGTG AGGCCGCTCT ACAAACGCTG CTTGCTGACA ATGGCATCGA ACCTATCTGT ATCGGCCAGT TAGTTGAAAA AAATGCGGCA ATGACCGTGG AGCTCATCTA A
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Protein sequence | MSDSEIKLTE YSHGAGCGCK ISPKVLGTIL ATQLPVFDDP NLLVGNQTRD DAAVYKLNET TGIISTTDFF MPIVDDPFTF GRIAATNAIS DIYAMGGTPM MAIAILGWPV NKLPAEVAQQ VVDGGRKACA DAGIMLAGGH SIDSPEPIFG LAVTGQIPLD ELKQNDTAKA GDKLYLTKPL GIGILTTAQK QKKLADADLN TAAEAMCQLN VLGPKIAKIS QVNALTDVTG FGLAGHLLEM CHGADLSAKL DISLLPLLPN ARHYLQLGCI PGGTHRNFDS YGEHLPELTE EQKAIICDPQ TSGGLLIAVA TDSEAALQTL LADNGIEPIC IGQLVEKNAA MTVELI
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