| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0096 |
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| Symbol | |
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| ID | 5660497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 107416 |
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| End bp | 108756 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641234609 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001499960 |
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| Protein GI | 157959926 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAA AGTACAATTA TAGCGGTCCA CGTTATACTT CTTATCCGAC GGCCTTGGAA
TTCGATGACT CGTTTACCGA GGAAAAATTG CTGACTTCTA TCAAGAACAG CAAGAGTGAC
AAACTTTCTC TTTATATCCA TATTCCTTTC TGCGCCAAGC TTTGTTACTA CTGTGGCTGC
AATAAAGTTA TCACTCGTCA TCAGCATAAA GCCGATCAGT ACATTGAGTA CTTAGCAGCA
GAAATCGTTA AACGTGCACC GCTGTTTAAA AATTACTTAG TTACCCAAAT TCACTGGGGT
GGTGGTACAC CGACATTCCT AACTCCTGAG CAAATTCTTA AGCTATCAGC ACTCATTAAG
GCTAACTTCA ACGTTGCCGA TGTAGGTGAA TACTCAATCG AAGTCGACCC GCGTGAAATC
GAACTTTCGA TGCTAGACAC CCTAAAAGAA GCCGGCTTCA ACCGTATCTC TATCGGTGTT
CAAGACTTCA ACAAGAAAGT GCAAGTTGCA GTAAACCGTG AGCAAGACGA GCAGTTTATC
TTCGACCTAA TGGCACGCGC TAAAGAGCTA GGCTTTGTTT CAACTAACAT CGACTTAATC
TACGGCTTGC CGCACCAGAC ACCAGAGACC TTTGCTGAAA CCATGCAGCG CGTACTGGAT
CTAAACCCAG ACCGTCTATC TGTATTTAAC TACGCTCACC TGCCATCACG TTTTGCAGCC
CAGCGTAAGA TTAAAGACGA AGACTTAGCG TCACCACAGC AGAAGCTTGA TATGTTACAC
CAAACTATCG AGACGCTAAC GGGCGCAGGT TACCAATACA TTGGTATGGA CCACTTTGCT
AAGCCAGATG ACGAGCTGTC TATTCTGCAA AACGAAGGTC GTCTACACCG TAACTTCCAA
GGTTACACGA CTCAAGAAGA GTGTGATCTA TTGGGTCTAG GTGTGTCTTC AATCAGCCAA
ATTGGCGATT GCTACGCACA GAACCAGAAA GACATTCGTC CATACTTCGA GTCAATCGAT
GCTAATGGTC ATGCACTCTG GAAAGGTTGT AGCTTAAACC GTGACGACGA AATTCGCCGC
GTAGTGATTA AGCAGCTTAT CTGCCACTTC GACCTAGATA TGGCGAAGAT TGAAGAGAAG
CTAAACATCA ACTTCGAAGA GTATTTCGCA GAAGACTTAA AGCTACTGCA AACCTTCATC
GATGATAAGC TAGTCGACAT AACAGACCGC AAGATCACTA TCAGCCCTAC TGGCCGCCTG
TTGATCCGTA ACATCTGTAT CTGTTTCGAT GTTTACTACC GTGAGAAAGC AAGACAACAG
CAGTTCTCTC GCGTTATCTA A
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| Protein sequence | MIEKYNYSGP RYTSYPTALE FDDSFTEEKL LTSIKNSKSD KLSLYIHIPF CAKLCYYCGC
NKVITRHQHK ADQYIEYLAA EIVKRAPLFK NYLVTQIHWG GGTPTFLTPE QILKLSALIK
ANFNVADVGE YSIEVDPREI ELSMLDTLKE AGFNRISIGV QDFNKKVQVA VNREQDEQFI
FDLMARAKEL GFVSTNIDLI YGLPHQTPET FAETMQRVLD LNPDRLSVFN YAHLPSRFAA
QRKIKDEDLA SPQQKLDMLH QTIETLTGAG YQYIGMDHFA KPDDELSILQ NEGRLHRNFQ
GYTTQEECDL LGLGVSSISQ IGDCYAQNQK DIRPYFESID ANGHALWKGC SLNRDDEIRR
VVIKQLICHF DLDMAKIEEK LNINFEEYFA EDLKLLQTFI DDKLVDITDR KITISPTGRL
LIRNICICFD VYYREKARQQ QFSRVI
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