Gene Spea_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0095 
Symbol 
ID5660496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp105266 
End bp107065 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content50% 
IMG OID641234608 
Producthypothetical protein 
Protein accessionYP_001499959 
Protein GI157959925 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATAC TCATGTATAA ATACCTACTT CCCTCAGTAC TAGTCTTGGG TCTCAGCGCC 
TGCCAAGCCA CGACATCAAC GGCGCCTCAG TCAGATGTCA GCACTCAACA AGTCGCAACC
CACAATCAAC TCCAGTCCAT TATTGATGCC GCCTGGCAAA CATCGCTAGA TGCTAGCCCT
AGTTTTGCCT ACTCTCTAGG TGATAAGACG GCCGCCGGTA AACTGCAAGA CCTGTCGCCA
ACGGCACTCG AAGCAATGGA TCAGCGCAAA CAGCAGTTAC TCAAACAATT GCTGCAGATA
GACAGCAGCC GCTACAGCAA AGAAGACGCT ATCAACGCAC AGATACTGCG CGACCAACTG
CAAAACGATG TTGACCAATA TCGCTATAAA GATCACTACA TGCCAATCTC GGCGGAAGGC
GGTTTTCATG CTTATATCGC CTCGATTGCC AAGGGGCGCT TTGCCAAAGT CGAGGACTAC
CACAACTACA TAAAGCAGCT GCAAGCACTG CCTGAGTATT TCCAGCAGCA GACCTATTGG
TTAAACCAAG GTCTAGATGC AGGCATCACC CCAGCTAAGG CCACCCTCAA AGGGTTTGAA
ACCAGCATCA GCGCCTTTAT CGTGCCAGTA GAAGACAGTG GTTATTTCAA ACCCTTCACT
CAGTATCCAG CGCATTTCAG TGAGGCAGAA AAAGCCGAAC TAACTAAACA GGGCCGCGCC
TTAGTGCAAC ACACTGTACT TCCTCAGTAC CAAGCCTTCT TCGACTTCAT CACCAAGGAA
TATATCCCAA ACACTCGTGA GAGTATTGCG ACCTACGACC TTCCCGATGG TGAAGCCTTC
TATGAGAATC GCGTGCGTTA TTACACCACC CTAGATATGA CCTCTGATGA GGTGCACCAG
CTGGGCTTAC AAGAAGTTAA GCGCATTCGA GGTGAGATGC AGCAGATCAT CGAACAGGTG
GGGTTCGAAG GTAGCTTTGC CGAGTTCCTA CACTTTTTAA GAACCGACCC ACAGTTCTAC
CCTGAGACAG CGGAAGAGTT ACTCAAGGAA GCGGCCTATA TCGCCAAGCA AGCCGATGCC
ATGCTGCCTA AGTATTTTGG TAAGCTTCCA CGCCAACCTT ATGGAATCGA ACCCGTTCCC
GCCGAAATCG CGCCTAAATA CACCACGGGG CGTTACTCAG GTTCAAATCG CGCAGATGAA
GCCGGTTATT ACTGGGTCAA CACCTACGCG CTAGATAAGC GCCCACTGTA CGAGATGGAA
GCACTCACTC TGCATGAAGC CGTACCCGGC CACCACCTTC AAATTGCACT TAATCAGGAG
TTAACTAACC TGCCCGACTT CCGTCGTTAC AGCTATATCT CGGCGTTTGG TGAAGGTTGG
GGCCTCTACT CTGAGTATCT GGGGTTAGAG GCTGGCTTCT ACCAAGACCC TTATAGTAAC
TTTGGCCGTT TGACCTATGA AATGTGGCGC GCAGCGCGTC TCGTAGTGGA TACCGGCATG
CACGCCAAAG GTTGGTCTCG CCAACAAGCA ATCGACTTTA TGGCCAGCAA CACCGCACTA
TCGATGCATA ACGTCAATAC AGAGATTGAC CGCTACATCA ACTGGCCAGG ACAAGCCTTG
TCATACAAGA TTGGTGAGCT GACAATTAAA CGTTTGCGAG CTCAAGCAGA AGTAGAACTG
GGCGAGAACT TCGATATCCG CGCCTTCCAT GACGCTATCT TAGCCAATGG TTCTGTGCCT
ATGTCAGTAC TGGAGCAGCA GATAAACGAC TTTATCGCAA CTCAAAAGGT CGCCATCTAG
 
Protein sequence
MDILMYKYLL PSVLVLGLSA CQATTSTAPQ SDVSTQQVAT HNQLQSIIDA AWQTSLDASP 
SFAYSLGDKT AAGKLQDLSP TALEAMDQRK QQLLKQLLQI DSSRYSKEDA INAQILRDQL
QNDVDQYRYK DHYMPISAEG GFHAYIASIA KGRFAKVEDY HNYIKQLQAL PEYFQQQTYW
LNQGLDAGIT PAKATLKGFE TSISAFIVPV EDSGYFKPFT QYPAHFSEAE KAELTKQGRA
LVQHTVLPQY QAFFDFITKE YIPNTRESIA TYDLPDGEAF YENRVRYYTT LDMTSDEVHQ
LGLQEVKRIR GEMQQIIEQV GFEGSFAEFL HFLRTDPQFY PETAEELLKE AAYIAKQADA
MLPKYFGKLP RQPYGIEPVP AEIAPKYTTG RYSGSNRADE AGYYWVNTYA LDKRPLYEME
ALTLHEAVPG HHLQIALNQE LTNLPDFRRY SYISAFGEGW GLYSEYLGLE AGFYQDPYSN
FGRLTYEMWR AARLVVDTGM HAKGWSRQQA IDFMASNTAL SMHNVNTEID RYINWPGQAL
SYKIGELTIK RLRAQAEVEL GENFDIRAFH DAILANGSVP MSVLEQQIND FIATQKVAI