Gene Spea_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0084 
Symbol 
ID5660485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp94286 
End bp94624 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content46% 
IMG OID641234597 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_001499948 
Protein GI157959914 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATG CCAATATAGC CAGTGCTCAG TTAATGATGC AACAGCTCAA CATCCATTCA 
GAGATGGCAA AAGGAGCGAT AAGCGTCACG CCCAATCCAA GAGATTTTGG GCTACAGCCA
CCTTCATTTA CTGAATTGAT GAAAAATAAA GTGGCCGCCG TCAATACTGA TCAAAATGCA
TCGGCAGCCC TAATGAGAGC GGTAGATACA GGTCAGAGTG GTGACTTAGT CGGCGCCATG
GTGGCCTCGC AAAAAGCGGG ACTCGCTTTT TCCACCATGA TCCAAATTCG AAATCGTTTA
GTACAAGCGT TTGACGAAGT TATGAAGATG CCAGTCTGA
 
Protein sequence
MSNANIASAQ LMMQQLNIHS EMAKGAISVT PNPRDFGLQP PSFTELMKNK VAAVNTDQNA 
SAALMRAVDT GQSGDLVGAM VASQKAGLAF STMIQIRNRL VQAFDEVMKM PV