| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0084 |
|---|
| Symbol | |
|---|
| ID | 5660485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 94286 |
|---|
| End bp | 94624 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641234597 |
|---|
| Product | flagellar hook-basal body complex subunit FliE |
|---|
| Protein accession | YP_001499948 |
|---|
| Protein GI | 157959914 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1677] Flagellar hook-basal body protein |
|---|
| TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATG CCAATATAGC CAGTGCTCAG TTAATGATGC AACAGCTCAA CATCCATTCA
GAGATGGCAA AAGGAGCGAT AAGCGTCACG CCCAATCCAA GAGATTTTGG GCTACAGCCA
CCTTCATTTA CTGAATTGAT GAAAAATAAA GTGGCCGCCG TCAATACTGA TCAAAATGCA
TCGGCAGCCC TAATGAGAGC GGTAGATACA GGTCAGAGTG GTGACTTAGT CGGCGCCATG
GTGGCCTCGC AAAAAGCGGG ACTCGCTTTT TCCACCATGA TCCAAATTCG AAATCGTTTA
GTACAAGCGT TTGACGAAGT TATGAAGATG CCAGTCTGA
|
|---|
| Protein sequence | MSNANIASAQ LMMQQLNIHS EMAKGAISVT PNPRDFGLQP PSFTELMKNK VAAVNTDQNA
SAALMRAVDT GQSGDLVGAM VASQKAGLAF STMIQIRNRL VQAFDEVMKM PV
|
|---|
| |