Gene Spea_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0081 
SymbolfliH 
ID5660482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp90681 
End bp91436 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content49% 
IMG OID641234594 
Productflagellar assembly protein H 
Protein accessionYP_001499945 
Protein GI157959911 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACTG AAATCAAAAG CTCAGACCCT CGCTGGCGCC TTACTGGTGC CCATGCTCGC 
CGTCACCGTT TTTCGCCTCT TATCGCTCCC GAAACCGATG CCGAACAAAG TGAAATGAGC
TGGCAAGATT TTCAGCAGGC TTTCGATAAA GGCTATGATG ATGGCGTGCA AAAAGGCCAT
CAAGCCGGCT TTGATGCAGG TGTTGAAGAG GGACGTCAGT CTGGCCATGC CGCAGGATTC
AACCAAGGGC GCATTGAAGG TCAGCAAAAA GGTAAAGACA ATATCGATGA CCAGCTTAAT
AGTATTATCG CTCCTTTAGG TGCCCTGAAG TCACTACTCG AAGAAGGCCA TAGTCAGCAG
ATAGCGCAGC AGCAAACGCT GATCTTAGAT CTCGTTCGCC GAGTATCCTT ACAGGTGATC
CGCTGCGAAC TGACCCTGCA ACCACAACAG ATCTTAAATT TGGTTGAAGA GACATTAAGC
GCGCTACCAG ATGATCCAAC CGAGGTTAAA ATCCATCTTG AACCGAGTGC AGTAGATAAG
CTTAAAGAGC TGGCAGCCGA TAAGATTAAG CATTGGACGC TGGTTGCAGA CGCCAGTATT
AGTGCCGGTG GTTGCCGTAT CGTTAGCGCC ACCTCAGATG CTGATGCATC GGTAGAGACT
CGCCTTAATA GCTGTTTAGC CCAAGTTCAG GCTCACCTTA ACGAGACCCC GATAGCGGCA
TCTAGCTTAG CAAATGAGGC TGACGTTGAA ATTTAA
 
Protein sequence
MTTEIKSSDP RWRLTGAHAR RHRFSPLIAP ETDAEQSEMS WQDFQQAFDK GYDDGVQKGH 
QAGFDAGVEE GRQSGHAAGF NQGRIEGQQK GKDNIDDQLN SIIAPLGALK SLLEEGHSQQ
IAQQQTLILD LVRRVSLQVI RCELTLQPQQ ILNLVEETLS ALPDDPTEVK IHLEPSAVDK
LKELAADKIK HWTLVADASI SAGGCRIVSA TSDADASVET RLNSCLAQVQ AHLNETPIAA
SSLANEADVE I