Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0081 |
Symbol | fliH |
ID | 5660482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 90681 |
End bp | 91436 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641234594 |
Product | flagellar assembly protein H |
Protein accession | YP_001499945 |
Protein GI | 157959911 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACTG AAATCAAAAG CTCAGACCCT CGCTGGCGCC TTACTGGTGC CCATGCTCGC CGTCACCGTT TTTCGCCTCT TATCGCTCCC GAAACCGATG CCGAACAAAG TGAAATGAGC TGGCAAGATT TTCAGCAGGC TTTCGATAAA GGCTATGATG ATGGCGTGCA AAAAGGCCAT CAAGCCGGCT TTGATGCAGG TGTTGAAGAG GGACGTCAGT CTGGCCATGC CGCAGGATTC AACCAAGGGC GCATTGAAGG TCAGCAAAAA GGTAAAGACA ATATCGATGA CCAGCTTAAT AGTATTATCG CTCCTTTAGG TGCCCTGAAG TCACTACTCG AAGAAGGCCA TAGTCAGCAG ATAGCGCAGC AGCAAACGCT GATCTTAGAT CTCGTTCGCC GAGTATCCTT ACAGGTGATC CGCTGCGAAC TGACCCTGCA ACCACAACAG ATCTTAAATT TGGTTGAAGA GACATTAAGC GCGCTACCAG ATGATCCAAC CGAGGTTAAA ATCCATCTTG AACCGAGTGC AGTAGATAAG CTTAAAGAGC TGGCAGCCGA TAAGATTAAG CATTGGACGC TGGTTGCAGA CGCCAGTATT AGTGCCGGTG GTTGCCGTAT CGTTAGCGCC ACCTCAGATG CTGATGCATC GGTAGAGACT CGCCTTAATA GCTGTTTAGC CCAAGTTCAG GCTCACCTTA ACGAGACCCC GATAGCGGCA TCTAGCTTAG CAAATGAGGC TGACGTTGAA ATTTAA
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Protein sequence | MTTEIKSSDP RWRLTGAHAR RHRFSPLIAP ETDAEQSEMS WQDFQQAFDK GYDDGVQKGH QAGFDAGVEE GRQSGHAAGF NQGRIEGQQK GKDNIDDQLN SIIAPLGALK SLLEEGHSQQ IAQQQTLILD LVRRVSLQVI RCELTLQPQQ ILNLVEETLS ALPDDPTEVK IHLEPSAVDK LKELAADKIK HWTLVADASI SAGGCRIVSA TSDADASVET RLNSCLAQVQ AHLNETPIAA SSLANEADVE I
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