Gene Spea_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0080 
Symbol 
ID5660481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp89366 
End bp90703 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content52% 
IMG OID641234593 
ProductFliI/YscN family ATPase 
Protein accessionYP_001499944 
Protein GI157959910 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR03496] flagellar protein export ATPase FliI
[TIGR01026] ATPase FliI/YscN family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTGA CGTTGAAATT TAACGCCGAC ATTTTAGATT GGCCTAAGGT TCCCGTCGCG 
CAAGTATACG GACGACTCAC TCGAGTCAAC GGCTTATTAC TTGAGGCGGT TGGATGCCAG
CTGGGCACCG GGGACAGATG TCACATAGAA TGTCGTGATA AACAATTGGT AGAAGCCGAA
GTCGTTGGCT TCTACAAAGA CACCCTATGC TTAATGCCTA TCGAAGCGGC ATCTGGGTTA
ATGCCTGGTG CTCGAGTCAT GCCTATTGAA GGCCGATGCC TTATTCCTTC AGGCCTAGGC
ATTCTCGGCC GCGTGCTCGA CGGCTTAGGC CAGCCATTAG ACGGACTCGG CTGCATTAAG
CACTTACCTC ATGTGCCACT ACAGCATAAA CCCACCAACC CCTTAATGCG TAAAGCCATT
GAAGAACCAT TGGATGTTGG GATAAGAGCC ATCAATGCCC TACTCCCTAT CGGCCGTGGC
CAGCGCCTAG GCCTTTTTGC CGGTTCAGGT GTCGGTAAAA GTGTGCTGTT AGGCATGATG
ACCCGCTTTA CTGAAGCCGA TGTTGTGGTA GTAGGTCTAA TAGGTGAACG TGGCCGAGAG
GTCAAAGAAT TTATCGATGA GTCACTAGGT GAAGAGGGAC GCAAGCGAGC GGTCGTCATT
GCAGCCCCAG CCGATACCAC ACCACTGATG CGAATGCGCG CAATGCGTTT ATGCCACCAC
ATTGCCGCCA CCTATCGCGA CCAAGGTAAA CAAGTATTAC TGCTGGTAGA CTCCTTAACT
CGATACGCAC AGGCCCAGCG TGAGATTGCG CTGAGTCTAG GTGAGCCACC AGCAACCAAG
GGCTATCCCC CTTCAGCTTT TGCTCAACTC CCCAGTTTGG TGGAGATGGC GGGTAATGGT
CAGCACCCTA CGGGCACACT TACCGCGTTT TACACCGTAT TAACCGAAGG TGATGATCAG
CAAGATCCTA TCGCCGACTC AGCTCGTGCA ATCTTAGATG GCCATATTGT CTTGAGCCGT
AAACTTGCAG AGAAAGGTCA CTTCCCCGCC ATAGATATTG GCGCGTCAGT GAGCCGACTG
GCAACCAAAG TCGCCAGTGA AGAAACCCTC AAGCAAGGCC AGTGGTTTCG GCATCTGAAT
AGCCGTTATA ACGAGGTAAA AGATCTATTG CCACTGGGGG GTTATCAAGC GGGTCACGAT
CCAGAGATGG ATATGGCGGT GAGCGCTTAC CCTAAAATGG CTGAGTTTTT ACGTCAAAGT
ACCAACTCAC AAGCCGATCA TGCCCATAGC ATCACGGCCT TAGCGCAATT AGTCAGCAAC
ATGGGATATT CATTGTAG
 
Protein sequence
MRLTLKFNAD ILDWPKVPVA QVYGRLTRVN GLLLEAVGCQ LGTGDRCHIE CRDKQLVEAE 
VVGFYKDTLC LMPIEAASGL MPGARVMPIE GRCLIPSGLG ILGRVLDGLG QPLDGLGCIK
HLPHVPLQHK PTNPLMRKAI EEPLDVGIRA INALLPIGRG QRLGLFAGSG VGKSVLLGMM
TRFTEADVVV VGLIGERGRE VKEFIDESLG EEGRKRAVVI AAPADTTPLM RMRAMRLCHH
IAATYRDQGK QVLLLVDSLT RYAQAQREIA LSLGEPPATK GYPPSAFAQL PSLVEMAGNG
QHPTGTLTAF YTVLTEGDDQ QDPIADSARA ILDGHIVLSR KLAEKGHFPA IDIGASVSRL
ATKVASEETL KQGQWFRHLN SRYNEVKDLL PLGGYQAGHD PEMDMAVSAY PKMAEFLRQS
TNSQADHAHS ITALAQLVSN MGYSL