Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0073 |
Symbol | |
ID | 5660474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 85819 |
End bp | 86478 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641234586 |
Product | flagellar hook capping protein |
Protein accession | YP_001499937 |
Protein GI | 157959903 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTGA CAGACGTAAG TAACACGAGT GGCGCTACAG ATAACATACA GAACTCTCCG GGTAACGATG CCGCTTCAAT CAAAAACGAA TTCATGACAT TGATGATTGC CCAGATCCAA AATCAGGACC CGACTAACCC TATCGATGGT ACTGAGTATG TTTCTCAACT CGCCCAGTTC TCACAAGTGG AAAGTTTGGA GCACATGCGC ACCAATCAGT CGATGCAGAT GGTGATGATG GAAAACCTTG GCATCGTCCA GTCGGCACAA TTGGTAGGAA AGAATGCCAT GGTTCCGGCA GCAGACTTCA CCCTTGATGA CAAGGCTCTG GACGGCAAAG TGTACCTAGA GGACTCGGTT GAAAGCCTCA GCATCGACAT CGTTGATAGC AGCGGTGACG TCATTAAGAC CGTAGAACTT GGTTCACAAG AAGCCGGCGA TACCGCTTTT AGTATCGACC CCGAAGCACT TGGTTTACCG CCGGGCGAAT ACAGCCTCGT CGCCAACACG ACTGCCGGTG ATGTAAGCAA AAAAGCCGAT ACATTTATTC AGGCTGAAAT CGAAAAAATT CATTTTATCA GTGCGTCAGG AATGATGATG GCAGAACTTG GCAATGGCCT CGGTACCATC TCTGTACTTG AAATATCTGA AGTCTCATAA
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Protein sequence | MNVTDVSNTS GATDNIQNSP GNDAASIKNE FMTLMIAQIQ NQDPTNPIDG TEYVSQLAQF SQVESLEHMR TNQSMQMVMM ENLGIVQSAQ LVGKNAMVPA ADFTLDDKAL DGKVYLEDSV ESLSIDIVDS SGDVIKTVEL GSQEAGDTAF SIDPEALGLP PGEYSLVANT TAGDVSKKAD TFIQAEIEKI HFISASGMMM AELGNGLGTI SVLEISEVS
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