Gene Spea_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0070 
Symbol 
ID5660471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp83033 
End bp83818 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content49% 
IMG OID641234583 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_001499934 
Protein GI157959900 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins
[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.584028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCAG CTTTATGGGT CAGTAAAACC GGCTTAACCG CCCAAGATAC TAAGATGACC 
ACCATTGCCA ACAACTTGGC AAACGTTAAC ACCACAGGTT TCAAACGCGA CCGCGTGGCC
TTTAATGATC TTTTCTATCA GGTACAACGC CAGCCTGGTG GTCAAGTTGA TGAACAGAAT
CAACTGCCTG CAGGCCTACA GCTGGGTACA GGTACTCGAG TTGCTGGTAC GCAAAAGGTA
TTCACCCCTG GTGACATGTT GACCACCAAT CAACAGCTAG ATTTGGCTAT TGAAGGCCAA
GGCTTCTTCC AAATCGAAGA GGCCAATGGT GATGTGAGCT TTACTCGAGA TGGCCAATTT
TACCGTGATA GCGATGGCTT AATGGTGACA TCTCAAGGCT TACCTTTAGT GCCTAACATC
CAAATTCCTG ATGAAGCACT GACAGTGACA ATCGCCTCCG ACGGTATTGT CTCGGCTCAA
ATGGCTGGCC AGGCGGACTC TCAAGAGCTA GGGCAAATCA CCCTAGTTAA CTTCACTAAC
CCTGCAGGTT TAGAAGCTCG TGGTAGCAAC TTATACCGTG AAACGGGCGC TTCTGGCGCT
GCGATTGAGG GGATAGCTGG CGATGAAGCC TTAGGCCAAG TTCGCCAAGG AGCGTTAGAA
GGCGCTAACG TAAACGTGGT CGAAGAGATG GTCGAGATGA TTTCGACACA ACGTGCTTAC
GAGATGAACG CCAAAGTCGT ATCGGCCTCT GACGATATGC TTAAGTTCCT AAATCAAGCG
CTGTAA
 
Protein sequence
MQSALWVSKT GLTAQDTKMT TIANNLANVN TTGFKRDRVA FNDLFYQVQR QPGGQVDEQN 
QLPAGLQLGT GTRVAGTQKV FTPGDMLTTN QQLDLAIEGQ GFFQIEEANG DVSFTRDGQF
YRDSDGLMVT SQGLPLVPNI QIPDEALTVT IASDGIVSAQ MAGQADSQEL GQITLVNFTN
PAGLEARGSN LYRETGASGA AIEGIAGDEA LGQVRQGALE GANVNVVEEM VEMISTQRAY
EMNAKVVSAS DDMLKFLNQA L