Gene Spea_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0069 
SymbolflgH 
ID5660470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp82311 
End bp82985 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content48% 
IMG OID641234582 
Productflagellar basal body L-ring protein 
Protein accessionYP_001499933 
Protein GI157959899 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.320449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAAC TTCGGATAGG ATTTTGGATT GGCTTAGTAT TACTCTTATC TGGCTGTATC 
TCCCATATTC CTGAACTTGA TACTAAACCA GGAAAACCTG AGTGGGCACC GCCAGAAATA 
GATTACAGCT TGCCTGACGC CAAAGACGGT AGCGTCTACC GCCCTGGGTT TATGCTCACA 
CTATTCAAAG ATAAGCGTGC ATTTCGCGAA GGCGACATTC TTACCGTCGC CCTAGATGAA 
AAGACTTACT CGAGTAAAAG TGCTGACACT AAGACCAATA AAAACACGGG CTTGTCGCTT 
GATGGCCAAG GCACTACAGG TAACAACAGT ATCGCCGGTA GCGGCGAAGC CAACTTAGGT 
AGCTCTTTTA GCGGCACAGG TTCGAGCACG CAGCAAAACC AGCTATCAGG CTCAATCACG 
GTCACCGTGG CTAAAGTTTT ACCTAATGGC GCGCTATTAA TTCGTGGCGA AAAATGGCTC 
AGACTTAACC AAGGCGACGA GTACCTGCGT TTACTCGGGT TGATCCGTAC CGACGATATT 
GGCAACGACA ACACCATTTC ATCTCAGCGT ATCGCCGATG CTCGCATTAT CTATGGTGGC 
CAAGGTGCTA TTACCGATAG CAACCGTATG GGTTGGGCAT CACGCTACTT TAATAGCCCT 
TGGTTCCCGT TATGA
 
Protein sequence
MQQLRIGFWI GLVLLLSGCI SHIPELDTKP GKPEWAPPEI DYSLPDAKDG SVYRPGFMLT 
LFKDKRAFRE GDILTVALDE KTYSSKSADT KTNKNTGLSL DGQGTTGNNS IAGSGEANLG 
SSFSGTGSST QQNQLSGSIT VTVAKVLPNG ALLIRGEKWL RLNQGDEYLR LLGLIRTDDI 
GNDNTISSQR IADARIIYGG QGAITDSNRM GWASRYFNSP WFPL