Gene Spea_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0059 
Symbol 
ID5660460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp72616 
End bp73788 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content49% 
IMG OID641234572 
Productflagellar hook-length control protein 
Protein accessionYP_001499923 
Protein GI157959889 
COG category[N] Cell motility 
COG ID[COG3144] Flagellar hook-length control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATA ACTCGGTTTT ATCAGGCTGC ACAGCTCAAG CGTCAACGAC TAGCGGTCAA 
CTATCAACGC AAATAAAAAG CCATAGCTGT AATCACAATG ACGACCCGCT TGAACAACAT
CAAGCGGACG TATTGCCGTT CTCGTTGGCT TTCGCTTCAA TTGACACCAC TGACGCAAGT
CAACTGAGTC AAATACCACC TGGGTTATTG GCAGCAACCT CAACGGGTTC AGCCTTCTCA
GCTCAGAAAA ACGCAACAAC TTCGTTTTCT GCAGGCCATT ATGGACAGCA GCCACCAGCA
TCCTTGCAAA CTCAGTCTGT TGCTAACTTA ACGACTGGCT TAACTGCGGC TCAGGATACG
AGTGCACAGG CTTTACCGTT TTTGGAAGGC TCACCGCTCG CCCCTAAGCT GTCAACAGCG
CCCCCAAGCT CACAATACTC TAGCGCACAA GCTGTAAACC TGTCGATTGG ATCACAGGGA
ACAGGGCAAG CACAGACAAA CTCGCTTTCG ACGAGCAGCT ACCAACAGTT GTCATCCCAG
GCTAACTCTG TCACGCCCCA GACTAGCTTG CCTCAGCAAA CTGGAACGCT AAAGAGTGAC
ACCATGATGA GCCAGAGTTT ATTTCAAGCA ATGAACTCGC CACTGCAAGC ATCAATAACC
GATACCGCTT CCGTAGACAT TGTTGACTCT GTTAACCAGA TTTTGGCATC GAGTACTCGT
TCGCAAACAG CTGTCGCACA GTGGGGACCG GTTGCGGTTT CTCAGACAGC TCCTTTGTTG
CAACAAGCTC ATGAGATGCT ATCTCCTCTA CGAGAGCAAT TGAAGTTTCA AATCGATCAA
CAAATTAAGC AGGCCGAAAT CAGGCTCGAT CCGCCCGAGC TAGGTAAGGT TGAGCTCAAT
GTACGCTTAG ACGGTGATCG CTTACACATT CAAATGCATG CCGCGAACTC ATCGGTGCGC
GACGCTCTAT TAATGGGCCT AGATAGATTA CGCGCCGAGC TAGCAATGGA TCATGGTGGT
CAGATTGATG TCGATATTAG TCAGGATGAC CGCCCTCAAA AGCAAGATAC ACAAGCGTCT
GACTTCGCTA TTGCTGCCGC GACAAACAAT GGAACAGAAA CGTCTTTTAA CAGCCACTCT
CAACAACAAG ATCACGTGGA TCTGTTAGCA TAA
 
Protein sequence
MINNSVLSGC TAQASTTSGQ LSTQIKSHSC NHNDDPLEQH QADVLPFSLA FASIDTTDAS 
QLSQIPPGLL AATSTGSAFS AQKNATTSFS AGHYGQQPPA SLQTQSVANL TTGLTAAQDT
SAQALPFLEG SPLAPKLSTA PPSSQYSSAQ AVNLSIGSQG TGQAQTNSLS TSSYQQLSSQ
ANSVTPQTSL PQQTGTLKSD TMMSQSLFQA MNSPLQASIT DTASVDIVDS VNQILASSTR
SQTAVAQWGP VAVSQTAPLL QQAHEMLSPL REQLKFQIDQ QIKQAEIRLD PPELGKVELN
VRLDGDRLHI QMHAANSSVR DALLMGLDRL RAELAMDHGG QIDVDISQDD RPQKQDTQAS
DFAIAAATNN GTETSFNSHS QQQDHVDLLA