| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0057 |
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| Symbol | fliA |
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| ID | 5660458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 71412 |
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| End bp | 72134 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641234570 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_001499921 |
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| Protein GI | 157959887 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACACTG CACTATCTGC CTATCAAGAA GCTGCTGAAG AAGTTGCGAT TAACCGTCTC
GCCGAAAGTC AGGTGATGAA GCAATACCTC CCTTTAGTTA AGCGTTCCGT ATCTCAACTT
AGAAGCCATT GTGGTATTGC GCTCGCGATA GAAGATATGG AACAGATAGG CATGATGGCG
CTATTAGAGT CAGCCCGTCG CTACCCAGGT GAGTACGACA ATGGCTTTTT GTCTTTTGCA
GGACAACGTA TTCGTGGCGC GATTCTAGAC GAGCTACGCC GCCAAGATTG GCGGCCACGT
CCCGTTAGGC AGCAAGCCCA CGAACTTAAC GATATGGTAC GAAAACTCAC TCGTTCGTTA
AAGCGAGAAC CCACTGATTT GGAGGTTGCA CAATCTATGG GACTTAGCCA AGTGGAGTAT
CGAGAACGCC TATTTGCATC TCAGTCTGAA TCGATGCGTA GCTTGGACGA ACTCATTGGT
GACGGCGGAC ACTTTGAAGA TAAAAGTGAC ATGTTGGAGC AATTTTCAAC AAAAGAAACG
TTATTCCAAG CTATTTTAAA ATTAAACAAA AGAGAACAGA TAATTCTGTC GCTTTACTAT
CAGCATGAAC TCAATTTAAA AGAAATCGCC GCAACATTAG GACTGACTGA GACACGTATT
TGCCAGCTGC ACAAACACGC AGTGAAACAA CTTCAGCAGA TCTATCAAGA ATGGGAGCGG
TAA
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| Protein sequence | MNTALSAYQE AAEEVAINRL AESQVMKQYL PLVKRSVSQL RSHCGIALAI EDMEQIGMMA
LLESARRYPG EYDNGFLSFA GQRIRGAILD ELRRQDWRPR PVRQQAHELN DMVRKLTRSL
KREPTDLEVA QSMGLSQVEY RERLFASQSE SMRSLDELIG DGGHFEDKSD MLEQFSTKET
LFQAILKLNK REQIILSLYY QHELNLKEIA ATLGLTETRI CQLHKHAVKQ LQQIYQEWER
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