Gene Spea_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0052 
Symbol 
ID5660453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp68035 
End bp68727 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content39% 
IMG OID641234565 
Productacylneuraminate cytidylyltransferase 
Protein accessionYP_001499916 
Protein GI157959882 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1083] CMP-N-acetylneuraminic acid synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAA ATAAACGAGT GTTAGCTCTT ATTCCCGCAA GAGGTGGAAG TAAGAGGTTA 
CCTCGAAAAA ATATATTACC TTTGGCAGGC ATACCTTTAA TAGCCTGGAC GATAGACGCT 
GCTCTTAAAT CAAAGTATAT CGACCGAGTT GTGGTCTCTA CTGACGATGA AGAGATTATG 
TGTGTCAGCA AGCAATTTGG AGCCGAAGCC CCCTTTGTTA GGCCTGTTGA GCTTGCGTCA 
GATACTGCAA CATCTACAGA CGTCGTTCTT CATGCGTTAA ATTTTTTTAA GAATGATTTT 
GATGTGATTG TTTTATTGCA GCCATCGTCC CCGCTAAGGG AAGAGAGTGA TATCGATAGG 
GTTATTGAGC AGTTAGTCAG CCAAGACGCA AATGGTATAG TTTCAGTAAG TGAGTGTGAG 
CACACTCCAT TGTGGTCAAA TACTTTACCG GCTGATGGAA ACATGTCTTC ATTTATAACA 
AAAGATGCGC TTAAGCGTTC TCAAGATTTA AAAACATTTT ACAGGTTAAA TGGGGCGATT 
TATTGTTATA AGACTGATTA TTTTATAGCG AATCAAGGAG GTAGCTACGC TGATGGTGTA 
TATGCTTGTA TCATGAAAAA AGAAAAGTCA GTTGATATCG ATGATATAAC CGACTTTAAA 
TTTGCAGAGT TTCTTATTGG TCTTTATCGC TAA
 
Protein sequence
MIKNKRVLAL IPARGGSKRL PRKNILPLAG IPLIAWTIDA ALKSKYIDRV VVSTDDEEIM 
CVSKQFGAEA PFVRPVELAS DTATSTDVVL HALNFFKNDF DVIVLLQPSS PLREESDIDR 
VIEQLVSQDA NGIVSVSECE HTPLWSNTLP ADGNMSSFIT KDALKRSQDL KTFYRLNGAI 
YCYKTDYFIA NQGGSYADGV YACIMKKEKS VDIDDITDFK FAEFLIGLYR