Gene Spea_0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0051 
Symbol 
ID5660452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp66980 
End bp68035 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content38% 
IMG OID641234564 
Productnucleotidyl transferase 
Protein accessionYP_001499915 
Protein GI157959881 
COG category[M] Cell wall/membrane/envelope biogenesis
[J] Translation, ribosomal structure and biogenesis
[T] Signal transduction mechanisms 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACT CTTGGAAAAA TATTTTAATA AAACCTGAGG CGACAATACT TGATGCTCTT 
GGGGTTATCG ATAATGAAGC ATTGCAAGTT GCCTTAGTAG TTAATAGTGA ACAAAAACTA
TTAGGTGTAA TAACCGATGG TGATATTCGT CGGGGGATAC TTAATAATTT GTCATTAGAC
ACTCCCGTCA CCGAAATAAT GAATTGCTCA CCAATTACAG CAGAGATGAG CTCAACGAAA
GAGCAATTGA CACAATTAAT GGAAAGTAAG AGCATACTTG CGATTCCGTT AATTGAAAAC
GGCAAAGTTG TTGGTTTAGA AACATTACAG AGATTACTTG AAACAACAAT CTATCAAAAC
CCTGTATTTA TAATGGCGGG AGGGTTTGGT ACTCGCTTAA GGCCTTTAAC AGATTCCTGT
CCAAAACCGA TGTTGAAAGT TGGTGACAAG CCAATATTGG ATATATTAAT TACTAACTTT
ATTAAAGCTG GTTTTGTCAA TTTCTATATA TCAACACATT ATATGGCTGA GCAAATTCGA
AGCTACTTCG GTGATGGTAG TGAGTTAGGA GTGAAAATTC ATTATATTCA TGAAGAGGCT
CCATTAGGTA CGGGGGGAGC ACTTGGTTTA CTGCCTGACG ACTTACCAAA AGGCTTACCT
TTGATCATGG TGAATGGAGA TGTGCTCACC AAGGTTGATT TTGAAAGGCT ATTAGATTTT
CATAATGAGC ATCAGGCCGA TGCCACCATG TGTGTACGAA AGTATGATTA TCAAGTTCCC
TATGGCGTTG TTAGTGGCGA AGGGAACAAG GTTACCTGCA TGGTTGAAAA GCCGGTTCAA
CATTTTTTTG TTAACGCAGG CATTTATGTC ATATCTCCAT GTGTGATTGA TTCTGTGCCT
AAAGATTATC ATATCGATAT GCCTACTCTA TTGGATCAGC ATATGAGTGA GCGTGAAAAC
GTTTTAATGT TTCCGGTTCA TGAATATTGG CTTGATATTG GTCGAATGGC TGATTTTGAA
CGAGCTCAAA CAGATATTTT AAGTTTAGGT TTGTAA
 
Protein sequence
MSNSWKNILI KPEATILDAL GVIDNEALQV ALVVNSEQKL LGVITDGDIR RGILNNLSLD 
TPVTEIMNCS PITAEMSSTK EQLTQLMESK SILAIPLIEN GKVVGLETLQ RLLETTIYQN
PVFIMAGGFG TRLRPLTDSC PKPMLKVGDK PILDILITNF IKAGFVNFYI STHYMAEQIR
SYFGDGSELG VKIHYIHEEA PLGTGGALGL LPDDLPKGLP LIMVNGDVLT KVDFERLLDF
HNEHQADATM CVRKYDYQVP YGVVSGEGNK VTCMVEKPVQ HFFVNAGIYV ISPCVIDSVP
KDYHIDMPTL LDQHMSEREN VLMFPVHEYW LDIGRMADFE RAQTDILSLG L