| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0047 |
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| Symbol | |
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| ID | 5660448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 62895 |
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| End bp | 64055 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641234560 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001499911 |
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| Protein GI | 157959877 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGA CACCAATTGT TGAGTTCGTT CGAGACATAT ACAAAACTGA CGATTTTATT
CCATTGCACG TACCGACGTT TAATGGCAAC GAAAAAGCTT ATGTTATGCA AACTATCGAA
AGCACTTTTG TTTCTAGTGT AGGTAAGTTT GTTGATGATT TCGAACGAAA GATAGAGGCT
TATACTGGTT CTGCTAAGGC GGTAGCGACA GTGAACGGTA CAGCAGCCTT GCATGCGGCA
CTGTACATGG CTGGTGTTCA GCGTGATGAT TTAGTTATTA CACAAGCGTT GACCTTTGTC
GCAACCTGCA ATGCCTTGCA TCATATGGGG GCTGAACCCA TCTTTGTCGA TGTTTCTCCT
ATTAGCTTGG GACTTTGTCC AAAAGCTGTG GAGGCTTACC TGTGCGAGTA TGCAGAGAAA
ACAGAAACAG GTTGTGTTCA CAAAGGCAGC GGGCAACGAA TCAAAGCTGT CGTGCCGATG
CATACATTTG GCCATCCCGT CGAATTAGAT GAACTTAATA TTGTTTGTCG GCAGTGGAAT
ATTACTTTAG TTGAAGATGC CGCTGAAAGC TTAGGCTCTT TTTACAAAGG CAAGCATACC
GGCACTATTG GTGATTTTGG TGCCCTGAGT TTTAATGGTA ATAAAATTAT CACCACCGGC
GGTGGCGGCA TGGTGTTATG CCAAACGGCA GAGTTTGGGG CGCGTACTAA ACACGTGACG
ACCACAGCAA AAGTGCCGCA TCCGTATGAA TTCTTCCATG ATGAGCCTGG CTTTAACTAC
CGCATGCCTA ATCTCAATGC TGCGTTAGGT TGTGCGCAAA TGGAAGCGCT AGAGAATTAC
CTGATTCAAA AGAGACAGCT TGCTGGGTTA TATGAAGGCT TTTTCAGCGG TTCAGATTTT
AAGTTTGTAA CTGAGCCAGG TTATGCACGG TCAAATTACT GGTTAAACGC GGTAATTTGC
CCGGATAAGC AGAGCAGAGA GGAAGTGCTC TCTGTTACAA ATAATTCAGG TGTGATGACT
CGTCCAATTT GGCAATTAAT GCATAGATTG CCAATGTTTA AAAATGCAAT GCGTGGTGAT
CTCTCCTGCT CAGAGTTTGT CGAAGCTCAT TTAATAAATC TTCCAAGTAC ACCCGTTGTA
CTAAATACCT CGCAGGGATA A
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| Protein sequence | MKATPIVEFV RDIYKTDDFI PLHVPTFNGN EKAYVMQTIE STFVSSVGKF VDDFERKIEA
YTGSAKAVAT VNGTAALHAA LYMAGVQRDD LVITQALTFV ATCNALHHMG AEPIFVDVSP
ISLGLCPKAV EAYLCEYAEK TETGCVHKGS GQRIKAVVPM HTFGHPVELD ELNIVCRQWN
ITLVEDAAES LGSFYKGKHT GTIGDFGALS FNGNKIITTG GGGMVLCQTA EFGARTKHVT
TTAKVPHPYE FFHDEPGFNY RMPNLNAALG CAQMEALENY LIQKRQLAGL YEGFFSGSDF
KFVTEPGYAR SNYWLNAVIC PDKQSREEVL SVTNNSGVMT RPIWQLMHRL PMFKNAMRGD
LSCSEFVEAH LINLPSTPVV LNTSQG
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