Gene Spea_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0033 
Symbol 
ID5660434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp36489 
End bp37508 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content47% 
IMG OID641234540 
ProductDNA protecting protein DprA 
Protein accessionYP_001499897 
Protein GI157959863 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[L] Replication, recombination and repair 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTAA CCGAACTGAG GCAAAGATTG ACGCATGAGC CACAAGCGTT GCCTTTACCA 
GAGTCGTTAC TACAATCTCA TCTTACTCCC GATCATGCTT TAGTTGATGC GGCCTTAGCA
TGGCAGCAAG CCGAAGCACA TCATCACCTT ATCTGCCTTG GTGATGCTAA TTACCCTCCA
TTATTGAAAC AGATTAACGA TCCTCCCCCT GTACTGTTTT TAAAGGGCAA TACAGATGCT
TTATTGTTTC CTGCTATGGC TGTTGTAGGA AGCCGTCTGG CCACTCCCGG CGGTAAGAGG
ATGGCGCATG AGTTAACAAC GGAATTAGCC CTAAATGGCA TGGCTATTAC GAGTGGCATG
GCTTTAGGGA TTGATGGGGT GGCTCATCGA GCAGCGATAG AGATTAATAA ACCCAGTATC
GCCGTACTCG GTACAGGGGT TGATGTTATC TATCCCAAGC GGCACCGTGA TATTTATAAT
GGCATTCAAG AGGATGGGTG TGTGCTCTCA GAGTTTTGGC CTGAGGTGAA GCCTTTTTCT
GGAAATTTTC CGAAACGAAA CCGTATTATC AGCGGTCTAA CTATAGGAAC ATTAGTGGTT
GAAGCAAGCC TGAGAAGTGG TTCATTGATC ACTGCGCGAC TTGCTAATGA ACAGGGGCGA
GAGGTATTTG CCGTTCCGGG AAGCGTACTA AGTGGTCAGA GCGAGGGTTG CCATAAGTTA
TTGCGTGAAG GTGCCAAGTT GGTCGAGACT TTGACTGACA TTTTAGAAGA AGTGACTTCT
TTATCGCACT TTCACCTTGA AGAAGTTAAA GCGTGCCACC ATATAGAGGG GGAAAGCGCC
TCTGATTTGC CATTTTCCTC GCTGTTAGCT AGTGTTGGCT ATGAGACCAC AACAATAGAT
GATGTGGTCG AGCATAGTGG AAAAACCATA GAGCTAGTAT TGGAGCAATT GCTTGAACTC
GAGCTGCAGG GTTGGATTTC TGCAGTCCCT GGTGGTTACA TAAGACTAAA GAGGAGCTAG
 
Protein sequence
MDVTELRQRL THEPQALPLP ESLLQSHLTP DHALVDAALA WQQAEAHHHL ICLGDANYPP 
LLKQINDPPP VLFLKGNTDA LLFPAMAVVG SRLATPGGKR MAHELTTELA LNGMAITSGM
ALGIDGVAHR AAIEINKPSI AVLGTGVDVI YPKRHRDIYN GIQEDGCVLS EFWPEVKPFS
GNFPKRNRII SGLTIGTLVV EASLRSGSLI TARLANEQGR EVFAVPGSVL SGQSEGCHKL
LREGAKLVET LTDILEEVTS LSHFHLEEVK ACHHIEGESA SDLPFSSLLA SVGYETTTID
DVVEHSGKTI ELVLEQLLEL ELQGWISAVP GGYIRLKRS