Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0029 |
Symbol | |
ID | 5660430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 32327 |
End bp | 33607 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641234536 |
Product | sun protein |
Protein accession | YP_001499893 |
Protein GI | 157959859 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTAA GAGCTTTGGC CGCTAAGGTC GTTTTTCAGG TGCTAGAAAA AGGTATCTCA CTTTCTGTGG CGCTACCCGA TCAGCAAAGA CATCTCGACA GTGGCAAAGA CAAGGCGCTA CTTGCCGAGC TTTGCTATGG CGTGATGCGT CATTTGCCAC AACTAGACAA GCAAGTCAGC GATTGCATGA GCAAGCAGAT GAAGGGTAAG CAGCGCATTG TGCACCAATT GCTGCTGATT GGCTGCTACC AGCTGTACTT CACGCGTATT CCTAGCCACG CGGCAATATC TGAAACGGCT GAAGCCTGTC GTCAGCTAAA GTTTGAAGGT TTAGTTAAGG TCGTTAATGG TGTCTTGCGT AATATTCAAC GCCAAGAAAA ACCATTAGCG ACAGACAACG ACACCTTAGC CTATAACACC CCAGCTTGGA TCATTAAGCG TTTAAAGGAT GCCTACCCTG ATAACTGGCA AAGTGTTATT GAGCAGAGTC ACGAACGTCC GCCTATGTGG CTGCGTAACA ATCAGCAATC GCAAACCAGA GAGACTTACC TACTAGCACT GGCTGGATTA GAGATAGAAG CGCAGGCCGG TAACAGCCCA GACTCGATTT TATTATCTAG CCCACGTGAT GTAATGCAAC TACCAGGTTT TGAAACTGGC GCAGCCTCGG TGCAAGATGG CGCAGCTCAA TGGGCAGCAA CGCTACTGGC ACCGCAGGGC GACGAGCTAG TACTTGATGC TTGTGCGGCA CCCGGCGGTA AAACTTGCCA CCTGCTAGAA CTTGCACCCA ACATTAAGCT GGTAGCGGTA GATTTCGACG CTAAACGCCT CGAACGTGTG CAGCAAAACC TTGATAGATT GTCACTCAAA GCTGAGTTAG TGCATGGCGA TGCCGCCAAT ATTGACTCAT GGTGGCAAGG TGACAAATTT GACCGTATCT TGCTCGATGC GCCTTGTTCG GCAACAGGTG TTATTCGTCG TCACCCAGAT ATTAAGTGGC TAAGAAAGAA CAACGACATC GAAGAGTTGG CGCAATTACA GTCACAAATT TTCGATCATT GCTGGAAGTG GTTAAAGCCC GGTGGCACAC TCTTATTCGC AACATGTTCG ATTTTGCCTC AAGAAAATAA AGATCAAGTC AGCGCCTTCT TAGCCAGAAC ACCTGATGCG ACCTTAGTGC CAATAGAAGA GCAAGCCAAC CCAGACGATA TCGGCTGGCA GATTGTTCCA GGACAAGACA ACATGGACGG CTTTTATTAC GCTCGCCTAG TGAAGGATTA G
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Protein sequence | MNLRALAAKV VFQVLEKGIS LSVALPDQQR HLDSGKDKAL LAELCYGVMR HLPQLDKQVS DCMSKQMKGK QRIVHQLLLI GCYQLYFTRI PSHAAISETA EACRQLKFEG LVKVVNGVLR NIQRQEKPLA TDNDTLAYNT PAWIIKRLKD AYPDNWQSVI EQSHERPPMW LRNNQQSQTR ETYLLALAGL EIEAQAGNSP DSILLSSPRD VMQLPGFETG AASVQDGAAQ WAATLLAPQG DELVLDACAA PGGKTCHLLE LAPNIKLVAV DFDAKRLERV QQNLDRLSLK AELVHGDAAN IDSWWQGDKF DRILLDAPCS ATGVIRRHPD IKWLRKNNDI EELAQLQSQI FDHCWKWLKP GGTLLFATCS ILPQENKDQV SAFLARTPDA TLVPIEEQAN PDDIGWQIVP GQDNMDGFYY ARLVKD
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