| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0027 |
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| Symbol | |
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| ID | 5660428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 29446 |
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| End bp | 30888 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641234534 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_001499891 |
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| Protein GI | 157959857 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGAACT ATCGTCCTCT ACTGTTTATT CTGGGAATTT TCCTATCGAC GCTGACCGCG
TTTATGTTAA TTCCCGGAGC CTTCGCCCTC TATTATGGTG AAGAGACTGT TGGTGCATTC
ATGATCTCCT CCTTGGCTGC TGGTAGCGCA GCCAGCTTTT GTATGCATCA AGGTCAGAGC
CGTAAACTAC ATCTCAATAT TCGAGATATG TTTCTACTAA CCTGCCTCAC TTGGCTCATC
GTCAGTCTTT TTGCGGCAAT GCCCTTTACC CTGTATCACG GCATCAACTA CACCGACGCC
TTCTTCGAAA CCATGTCGGG GATCACCACC ACGGGGTCTA CCGTGTTGTC GGGGCTAGAC
ACCATGGATC ACAGCATTCT GATCTGGCGC TCATTACTAC AATGGCTCGG TGGGATCGGT
TTTATCGTGA TGGCAGTAGC CGTACTGCCC TTCTTAAATG TTGGTGGTAT GCGGCTATTT
AGAACCGAGT CTTCAGACTG GAGCGACAAA ACCACCCCCC GTACCCAACA CATGGCCAAG
AACCTATTTA TTGTTTATTG CCTACTGACA TTCTTATGCT TCTTGGCATA TCACGGCAGC
GGCATGAACT GGTTCCAAGC TATCAACCAT GCCATGACAA CCCTATCTAC AGGCGGCTAC
TCCACTTCAG ATCAATCCAT GGCAGCATTT TCCAATGAAG CTCACTGGGT CGGCACCACC
TTTATGCTCG CTGGCGGATT GCCGCTGCTT ATGTTCGTCT ATATGGTGCA GCAACGTTCG
GTAAAAGTGT GGAACGACGC CCAGGTAAAA GGCTTTCTCA AGTTTGTGGC TTTCGTTTCT
TGTGCACTCG CCTTATGGCT TTGGAGCAGC AGAGGGATAG CACCTTTAGA TGCGCTGCGC
TTGGCCAGCT TTAACGTAGT ATCTGTGGTA ACAACCACAG GCTATGGCCT TACCGACTAC
ACCGCTTGGG GAGCATTGGC GAATATTGTG TTTCTATTCC TGATGTTTGT CGGTAGCTGT
TCGGGGTCAA CCTCTGGCGG CATCAAGATC TTTCGCTTTC AAATTGCCGG CGTGATTATG
CGTGAGCAAC TTAAGCAGCA ATTCCACCCT AACGGTGTGT TCAAAGAACG CTATAACAAC
CATATTGTTC GTGGAGATAT TGTCCGCTCA CTAGTCACTT TCATTCTGCT ATTTGTACTG
GTGATAGTGC TGCTATCCAT CATTTTGGTG TTAACAGGAC TCGATCCCGT CACTAGCTTT
ACCGGCGCCA TTACCGCAGT CACCAATGTT GGCCCAGGAT TAGGTAGCAC CATAGGGCCT
GCAGGCAACT TCTCATCTCT ACCAGATGTT GCAAAATGGG CATTAGCTAT CGGCATGCTA
CTAGGCCGCC TTGAGATCTT AACCGTCGCA GTCCTTTTCC ATCCTAGTTT CTGGAAGTAC
TAG
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| Protein sequence | MLNYRPLLFI LGIFLSTLTA FMLIPGAFAL YYGEETVGAF MISSLAAGSA ASFCMHQGQS
RKLHLNIRDM FLLTCLTWLI VSLFAAMPFT LYHGINYTDA FFETMSGITT TGSTVLSGLD
TMDHSILIWR SLLQWLGGIG FIVMAVAVLP FLNVGGMRLF RTESSDWSDK TTPRTQHMAK
NLFIVYCLLT FLCFLAYHGS GMNWFQAINH AMTTLSTGGY STSDQSMAAF SNEAHWVGTT
FMLAGGLPLL MFVYMVQQRS VKVWNDAQVK GFLKFVAFVS CALALWLWSS RGIAPLDALR
LASFNVVSVV TTTGYGLTDY TAWGALANIV FLFLMFVGSC SGSTSGGIKI FRFQIAGVIM
REQLKQQFHP NGVFKERYNN HIVRGDIVRS LVTFILLFVL VIVLLSIILV LTGLDPVTSF
TGAITAVTNV GPGLGSTIGP AGNFSSLPDV AKWALAIGML LGRLEILTVA VLFHPSFWKY
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