Gene Spea_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0026 
Symbol 
ID5660427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp28851 
End bp29390 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content45% 
IMG OID641234533 
Productprotoporphyrinogen oxidase 
Protein accessionYP_001499890 
Protein GI157959856 
COG category[H] Coenzyme transport and metabolism
[C] Energy production and conversion 
COG ID[COG4635] Flavodoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAG TTCTGGTACT TTACTATTCT CGCGGTGGAC ATACTGCCAG AATTAGCCGC 
GCCATGGCCG ATCACCTTAT GAGTGAAGGG CACCAGTGCG AAATGATGCA TATCAGTGAG
GCTAAGGCTG AAGGCGTCGA TTGGGCTAAG TATGATGTGG TCGCGTTAGG AGCCTGTGTG
CTTTACGGTA GTTACCATAA GTCAGTGTTT GAATTTGTCG AACAGCATCA AGCAGAGTTA
AGCGCTAAAG CATCTAGCTT CTTTAGTGTT AATGTTGTGG CGCGTAATCC TGAGAAGCGT
GTGCCGGAAA ATAATAAATA TCTACAGAAG TTTATTGAGC TAGCGGCTTG GAAACCAACA
GACGTTAAGG TGATTGCTGG TAAGGTAGAT TATCCAGCTT GGCGTTGGTA CGACAGAATG
ATGATCCAGC TGATCATGAA AATCACCAAT GGCCCAACCG ACCCAAAAGC TGTGATTGAT
TACACCGATT GGGAAGATGT GAAGGTCTAT GCAGACCACC TAGTGAGTTT AGCTAAATAA
 
Protein sequence
MKSVLVLYYS RGGHTARISR AMADHLMSEG HQCEMMHISE AKAEGVDWAK YDVVALGACV 
LYGSYHKSVF EFVEQHQAEL SAKASSFFSV NVVARNPEKR VPENNKYLQK FIELAAWKPT
DVKVIAGKVD YPAWRWYDRM MIQLIMKITN GPTDPKAVID YTDWEDVKVY ADHLVSLAK