| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0026 |
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| Symbol | |
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| ID | 5660427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 28851 |
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| End bp | 29390 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641234533 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_001499890 |
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| Protein GI | 157959856 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG4635] Flavodoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATCAG TTCTGGTACT TTACTATTCT CGCGGTGGAC ATACTGCCAG AATTAGCCGC
GCCATGGCCG ATCACCTTAT GAGTGAAGGG CACCAGTGCG AAATGATGCA TATCAGTGAG
GCTAAGGCTG AAGGCGTCGA TTGGGCTAAG TATGATGTGG TCGCGTTAGG AGCCTGTGTG
CTTTACGGTA GTTACCATAA GTCAGTGTTT GAATTTGTCG AACAGCATCA AGCAGAGTTA
AGCGCTAAAG CATCTAGCTT CTTTAGTGTT AATGTTGTGG CGCGTAATCC TGAGAAGCGT
GTGCCGGAAA ATAATAAATA TCTACAGAAG TTTATTGAGC TAGCGGCTTG GAAACCAACA
GACGTTAAGG TGATTGCTGG TAAGGTAGAT TATCCAGCTT GGCGTTGGTA CGACAGAATG
ATGATCCAGC TGATCATGAA AATCACCAAT GGCCCAACCG ACCCAAAAGC TGTGATTGAT
TACACCGATT GGGAAGATGT GAAGGTCTAT GCAGACCACC TAGTGAGTTT AGCTAAATAA
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| Protein sequence | MKSVLVLYYS RGGHTARISR AMADHLMSEG HQCEMMHISE AKAEGVDWAK YDVVALGACV
LYGSYHKSVF EFVEQHQAEL SAKASSFFSV NVVARNPEKR VPENNKYLQK FIELAAWKPT
DVKVIAGKVD YPAWRWYDRM MIQLIMKITN GPTDPKAVID YTDWEDVKVY ADHLVSLAK
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