Gene Spea_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0017 
SymbolfadA 
ID5660418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp19009 
End bp20172 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content49% 
IMG OID641234524 
Product3-ketoacyl-CoA thiolase 
Protein accessionYP_001499881 
Protein GI157959847 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR02445] fatty oxidation complex, beta subunit FadA
[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACG CCGTTATCGT AGATTGCATT CGTACTCCAA TGGGTCGCTC AAAGGCTGGA 
GTATTTAGAA ATGTACGCGC AGAAACTCTT TCTGCTGAAC TAATGAAGTC GCTACTTGAG
CGCAACCCAA AGCTTGACCC AAACACCATC GAAGATGTGA TGTGGGGTTG TGTGCAGCAA
ACCCTAGAGC AAGGCTTTAA TATTGCCCGT AACGCCGCCC TACTCGCTGG CATTCCAAAA
CAAGTCGGTG CTGTTACCGT AAACCGTTTA TGTGGTTCAT CTATGGATGC CCTACATCAG
GCTGCTCGTG CGATTATGAC TGGCCAAGGT GATACCTTTA TTGTTGGTGG TGTTGAACAC
ATGGGCCACG TACCGATGAA CCATGGTGTC GACTTCCATC CAGGTCTTGC TAATAACGTA
GCAAAAGCTT CTGCCATGAT GGGGCTTACA GCTGAGATGC TAGGTAAGAT GCATGGAATT
ACTCGTGAGC AGCAAGATGC CTTTGCGGTT CGCTCGCATC AACGTGCTCA CGCAGCTACA
GTTGAAGGCC GCTTCGCCAA TGAAATCGTA GCGATTGAAG GTCATGACGC CGATGGCGCA
TTGATTAAAG TCGAGCATGA TGAAGTGATC CGCCCTGAAA CCTCGATGGA ATCGCTATCG
GGTTTACGCC CAGCTTTTGA CCCAGCTAAC GGCACAGTTA CCGCAGGTAC CTCTTCTGCA
CTTTCAGATG GCGCCTCTGC CATGTTAGTC ATGGAAGAGG AAAAAGCCAA AGCGTTAGGC
CTGCCTATTC GTGCCCGTAT CCGCTCTATG GCTATTGCCG GTTGTGATGC TGCTATTATG
GGTTATGGCC CTGTACCTGC CACTCAAAAA GCCCTTAAGC GTGCAGGCCT AACCGTTGAT
GACATGGATG TTATCGAGCT TAATGAAGCC TTCGCCGCTC AGTCTCTACC TTGTGTTAAA
GACCTAGGTT TGATGGATGT GGTCGAAGAC AAAGTTAACC TCAACGGTGG TGCCATTGCA
CTAGGTCATC CACTAGGTTG TTCAGGTACG CGTATTTCAA CGACCTTGAT TAACCTGATG
GAAGCCAAAG ATGCCAAATA TGGTCTTGCG ACCATGTGTA TCGGTCTAGG CCAAGGTATC
GCGACTATCT TCGAGCGCCC ATAA
 
Protein sequence
MKNAVIVDCI RTPMGRSKAG VFRNVRAETL SAELMKSLLE RNPKLDPNTI EDVMWGCVQQ 
TLEQGFNIAR NAALLAGIPK QVGAVTVNRL CGSSMDALHQ AARAIMTGQG DTFIVGGVEH
MGHVPMNHGV DFHPGLANNV AKASAMMGLT AEMLGKMHGI TREQQDAFAV RSHQRAHAAT
VEGRFANEIV AIEGHDADGA LIKVEHDEVI RPETSMESLS GLRPAFDPAN GTVTAGTSSA
LSDGASAMLV MEEEKAKALG LPIRARIRSM AIAGCDAAIM GYGPVPATQK ALKRAGLTVD
DMDVIELNEA FAAQSLPCVK DLGLMDVVED KVNLNGGAIA LGHPLGCSGT RISTTLINLM
EAKDAKYGLA TMCIGLGQGI ATIFERP