Gene Spea_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0007 
SymbolglyQ 
ID5660408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp9663 
End bp10526 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content47% 
IMG OID641234514 
Productglycyl-tRNA synthetase subunit alpha 
Protein accessionYP_001499871 
Protein GI157959837 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0752] Glycyl-tRNA synthetase, alpha subunit 
TIGRFAM ID[TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGC AGGAATACTG GGCGCAGCAA GGTTGCGCTA TCGTTCAACC ATTGGACATG 
GAAGTGGGTG CTGGTACATT CCACCCGATG ACATTCTTAC GTTCATTAGG CCCAGAGCCT
ATGAGTAGTG CCTATGTTCA ACCATGTCGC CGCCCGACTG ATGGCCGTTA CGGTGAAAAC
CCTAACCGTC TTCAGCACTA CTACCAATTC CAAGTAGTAC TAAAGCCATC ACCAAGCAAC
ATTCAGGAAC TCTACCTAGG CTCACTAGAA GCCGTAGGTG TAGATATGAA TGTGCATGAC
GTTCGCTTCG TAGAAGACAA CTGGGAATCA CCAACACTGG GTGCTTGGGG CCTTGGCTGG
GAAATTTGGC TTAACGGTAT GGAAGTCTCT CAGTTCACTT ATTTCCAGCA AGTGGGTGGT
CTAGAGTGTA AGCCTGTAAC CGGCGAAATC ACTTACGGTC TTGAGCGTCT TGCTATGTAT
ATCCAAGAAG TAGACAGCGT TTACGATCTT GTTTGGACAG ACGGCCCTAT GGGTAAAGTC
ATGTACGGCG ATATCTTCCA TCAAAATGAA GTTGAGCAAT CAACTTATAA CTTCGAGCAT
GCCAATGTTG AAGTGCTATT TAAGATGTTT GATGACTGTG AGCAAGCTTG TGAGCGTTTA
TTAACGCTTG AAAAGCCACT TCCACTACCT GCTTATGAGC AAGTAATGAA AGCCTCTCAT
GCATTTAACC TGCTAGATGC ACGCCACGCT ATCTCTGTTA CTGAGCGCCA GCGTTATATC
CTACGCGTTC GTACCATGGC TAAAGGCGTT GCAGAATCTT ACTATCAGGC CCGTGAAGCT
CTTGGCTTCC CAATGTGTAA GTAG
 
Protein sequence
MTLQEYWAQQ GCAIVQPLDM EVGAGTFHPM TFLRSLGPEP MSSAYVQPCR RPTDGRYGEN 
PNRLQHYYQF QVVLKPSPSN IQELYLGSLE AVGVDMNVHD VRFVEDNWES PTLGAWGLGW
EIWLNGMEVS QFTYFQQVGG LECKPVTGEI TYGLERLAMY IQEVDSVYDL VWTDGPMGKV
MYGDIFHQNE VEQSTYNFEH ANVEVLFKMF DDCEQACERL LTLEKPLPLP AYEQVMKASH
AFNLLDARHA ISVTERQRYI LRVRTMAKGV AESYYQAREA LGFPMCK