| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0001 |
|---|
| Symbol | dnaA |
|---|
| ID | 5664840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 223 |
|---|
| End bp | 1608 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641234508 |
|---|
| Product | chromosomal replication initiation protein |
|---|
| Protein accession | YP_001499865 |
|---|
| Protein GI | 157959831 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000102323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGTTT CACTTTGGCA ACAATGTATC GCAAGGCTGC AAGATGAGCT CTCTGCTCAG
CAATTCAGTA TGTGGATAAG ACCGTTACAA GCAGAAATGG AAGGCGATAC ACTCGTCATC
TATGCGCCTA ATCGTTTTGT TTTGGATTGG GTTAGGGATA AATACCTAAA TATCATCAAC
CAATTTTTTA CTGAACAAAT GGGTAGCGAT GCGCCAAGTT TGCGTTTCGA TATCGGTAGT
CGTCCGTCGG CTAAACCAGT TGTTCAGGCT ACAGCAGCAG TAAGAACTAG CAGACCAGTT
ACTCGAGAAG TGACTAAGCC TTCTTTTAAT ACTCCGCACG CAGAGCCAAT GGCTAATGCT
AATCACCGTA GTAACATTAA TCCGACTTAC CAGTTTGATA ACTTCGTTGA AGGTAAATCA
AACCAATTGG GTAAAGCGGC TGCTTTGCAG GTGGCTGAAA ATCCTGGTGG TGCGTATAAC
CCCTTGTTCC TTTATGGTGG CACAGGTTTA GGTAAAACTC ACTTATTGCA CGCTGTTGGT
AATGGCATTA TTAAAAATAA CCCGAATGCA AAAGTAGTTT ACATGCATTC AGAGCGTTTC
GTGCAAGACA TGGTTAAGGC GTTACAAAAT AACGCGATTG AAGAGTTTAA GCGCTACTAC
CGTAGTGTTG ATGCATTGTT TATCGATGAC ATCCAATTCT TCGCCAACAA AGATAGATCT
CAAGAAGAGT TCTTCCATAC CTTTAATGCG TTATTAGAAG GTAATCATCA GATCATTCTG
ACATCGGATA AATACCCGAA AGAGATCGAC GGTGTTGAAG ATCGTCTTAA ATCTCGTTTT
GGTTGGGGTC TAACAGTTGC CATTGAGCCA CCAGAATTAG AAACCCGTGT TGCGATCTTA
ATGCGTAAGG CACAAGAGAG TGGCATTAAC TTACCCGATG AAGTGGCATT CTTTATTGCT
AAGCGCTTAC GTTCGAACGT GCGTGAGCTT GAAGGTGCAC TGAACCGTGT TATTGCTAAC
GCTAACTTCA CTGGCCGTCC GATCACTATC GATTTTGTGC GTGAAGCACT ACGAGACTTA
CTTGCTCTAC AAGAGAAGTT GGTCACTATC GATAATATTC AGAAGACTGT AGCGGAATAC
TACAAGATCA AGATGGCAGA TATGTTATCT AAGCGTCGTT CACGTAGTGT GGCGCGTCCA
AGACAGATGG CAATGGCGTT ATCGAAAGAG TTAACTAACC AGAGCTTGCC AGAGATTGGC
GATGCGTTTG GTGGTCGTGA TCACACAACT GTATTACATG CATGTCGTAA AATTGCCCAG
TTGCGTGAAG AAAGTCATGA CATTAAAGAA GATTATGCTA ACTTGATAAG AACTTTATCT
TCTTAA
|
|---|
| Protein sequence | MAVSLWQQCI ARLQDELSAQ QFSMWIRPLQ AEMEGDTLVI YAPNRFVLDW VRDKYLNIIN
QFFTEQMGSD APSLRFDIGS RPSAKPVVQA TAAVRTSRPV TREVTKPSFN TPHAEPMANA
NHRSNINPTY QFDNFVEGKS NQLGKAAALQ VAENPGGAYN PLFLYGGTGL GKTHLLHAVG
NGIIKNNPNA KVVYMHSERF VQDMVKALQN NAIEEFKRYY RSVDALFIDD IQFFANKDRS
QEEFFHTFNA LLEGNHQIIL TSDKYPKEID GVEDRLKSRF GWGLTVAIEP PELETRVAIL
MRKAQESGIN LPDEVAFFIA KRLRSNVREL EGALNRVIAN ANFTGRPITI DFVREALRDL
LALQEKLVTI DNIQKTVAEY YKIKMADMLS KRRSRSVARP RQMAMALSKE LTNQSLPEIG
DAFGGRDHTT VLHACRKIAQ LREESHDIKE DYANLIRTLS S
|
|---|
| |