Gene Spro_4900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4900 
Symbol 
ID5603466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5436348 
End bp5437853 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content56% 
IMG OID640940476 
ProductD-ribose transporter ATP binding protein 
Protein accessionYP_001481120 
Protein GI157373131 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.200163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000993507 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAACCTT TACTGCAACT GAAAGGGATC GATAAAGCCT TTCCCGGCGT GAAGGCGCTT 
TCCGGCGCCG CACTCAGCGT TTATCCCGGC AAGGTGATGG CGCTGGTGGG GGAAAACGGT
GCCGGGAAAT CCACCATGAT GAAAGTGCTG ACCGGTATTT ATAACAAAGA CGCCGGCAGT
CAGTATTTTC TCGGTAAAGA GGTGGCATTC ACTGGGCCAA AGGATTCGCA AGAAGCGGGT
ATTGGCATTA TCCATCAGGA ACTGAACCTG ATCCCGCAGT TGACGATCGC GGAAAACATC
TTCCTCGGCC GCGAATTTGT GAACCGTATT GGCCGCATCG ACTGGAAGCG CATGTATGCC
GAAGCCGACA AGCTGTTGAC GCGGTTAAAC CTGAGTTACA GCAGCCACCG GCTGGTGGGC
GAGCTGTCGA TCGGCGATCA GCAGATGGTG GAAATCGCCA AGGTGCTGAG CTTCGAATCC
AAAGTGATCA TTATGGATGA ACCGACGGAT GCGCTAACCG ACACTGAAAC CGCCTCTTTA
TTTAAAGTGA TCAACGAGCT GAAGGCCGAA GGGCGCGGCA TCGTTTATAT TTCGCACCGG
CTGAAAGAGA TTTTTGAAAT TTGCGACGAC GTCACGGTGT TTCGTGACGG GCAGTTTATT
GCCGAGCGTC CGGTCAGCGA GCTGCAGGAA GATTCGCTGA TAGAAATGAT GGTCGGCCGC
AAGCTGGAAG AACAGTACCC ACGCCTGAAT CTGCCGCGCG GCGAAAAACG GCTGGAGGTC
AGCCAGGTTT CCGGTCCGGG TGTGGATGAC GTCAGCTTTA CCCTGTACCG GGGCGAAATA
CTAGGTGTGG CCGGGCTGAT GGGCGCCGGG CGTACCGAGC TGATGAAAAT TCTCTACGGT
GCCGCACCGC GCAAATCCGG TACCGTCAGC CTCGACGGCC GCCCGGTGGT GACCCATTCT
CCGCAGGACG GTCTGGCGAA CGGCATTGTG TATATCTCCG AAGACCGCAA GCGCGATGGC
CTGGTGCTGG GGATGTCGGT GAAGGAAAAC ATGTCGCTGA CGGCACTGCG CTATTTCAGC
CGTGCCGGTG GCAGCCTGAA ACAGGCAGAA GAGCAACAGG CCGTGGGTGA CTTCATCCGT
TTGTTCAATA TCAAGACGCC GTCGATGGAA CAGCCGATTG GCCTGCTCTC CGGTGGCAAT
CAACAGAAAG TGGCGATCGC CCGTGGCCTG ATGACGCGGC CAAAGGTGCT GATCCTCGAC
GAGCCGACGC GCGGTGTCGA CGTCGGTGCA AAAAAAGAAA TCTATCAGTT AATCAACCAG
TTCAAGCAGG AAGGGCTGAG CATCATTCTG GTGTCTTCGG AAATGCCGGA GGTGCTGGGC
ATGAGCGACC GCATCCTGGT GATGCACGAA GGACATCTCA GCGGTGAATT CCCGATTGAA
CAGGCCACCC AGGAAGCGTT GATGGCTGCG GCCGTTGGCA AGCAATACGG CGTAAAGCAG
GAGTAA
 
Protein sequence
MQPLLQLKGI DKAFPGVKAL SGAALSVYPG KVMALVGENG AGKSTMMKVL TGIYNKDAGS 
QYFLGKEVAF TGPKDSQEAG IGIIHQELNL IPQLTIAENI FLGREFVNRI GRIDWKRMYA
EADKLLTRLN LSYSSHRLVG ELSIGDQQMV EIAKVLSFES KVIIMDEPTD ALTDTETASL
FKVINELKAE GRGIVYISHR LKEIFEICDD VTVFRDGQFI AERPVSELQE DSLIEMMVGR
KLEEQYPRLN LPRGEKRLEV SQVSGPGVDD VSFTLYRGEI LGVAGLMGAG RTELMKILYG
AAPRKSGTVS LDGRPVVTHS PQDGLANGIV YISEDRKRDG LVLGMSVKEN MSLTALRYFS
RAGGSLKQAE EQQAVGDFIR LFNIKTPSME QPIGLLSGGN QQKVAIARGL MTRPKVLILD
EPTRGVDVGA KKEIYQLINQ FKQEGLSIIL VSSEMPEVLG MSDRILVMHE GHLSGEFPIE
QATQEALMAA AVGKQYGVKQ E