Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4900 |
Symbol | |
ID | 5603466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 5436348 |
End bp | 5437853 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640940476 |
Product | D-ribose transporter ATP binding protein |
Protein accession | YP_001481120 |
Protein GI | 157373131 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.200163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000993507 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAACCTT TACTGCAACT GAAAGGGATC GATAAAGCCT TTCCCGGCGT GAAGGCGCTT TCCGGCGCCG CACTCAGCGT TTATCCCGGC AAGGTGATGG CGCTGGTGGG GGAAAACGGT GCCGGGAAAT CCACCATGAT GAAAGTGCTG ACCGGTATTT ATAACAAAGA CGCCGGCAGT CAGTATTTTC TCGGTAAAGA GGTGGCATTC ACTGGGCCAA AGGATTCGCA AGAAGCGGGT ATTGGCATTA TCCATCAGGA ACTGAACCTG ATCCCGCAGT TGACGATCGC GGAAAACATC TTCCTCGGCC GCGAATTTGT GAACCGTATT GGCCGCATCG ACTGGAAGCG CATGTATGCC GAAGCCGACA AGCTGTTGAC GCGGTTAAAC CTGAGTTACA GCAGCCACCG GCTGGTGGGC GAGCTGTCGA TCGGCGATCA GCAGATGGTG GAAATCGCCA AGGTGCTGAG CTTCGAATCC AAAGTGATCA TTATGGATGA ACCGACGGAT GCGCTAACCG ACACTGAAAC CGCCTCTTTA TTTAAAGTGA TCAACGAGCT GAAGGCCGAA GGGCGCGGCA TCGTTTATAT TTCGCACCGG CTGAAAGAGA TTTTTGAAAT TTGCGACGAC GTCACGGTGT TTCGTGACGG GCAGTTTATT GCCGAGCGTC CGGTCAGCGA GCTGCAGGAA GATTCGCTGA TAGAAATGAT GGTCGGCCGC AAGCTGGAAG AACAGTACCC ACGCCTGAAT CTGCCGCGCG GCGAAAAACG GCTGGAGGTC AGCCAGGTTT CCGGTCCGGG TGTGGATGAC GTCAGCTTTA CCCTGTACCG GGGCGAAATA CTAGGTGTGG CCGGGCTGAT GGGCGCCGGG CGTACCGAGC TGATGAAAAT TCTCTACGGT GCCGCACCGC GCAAATCCGG TACCGTCAGC CTCGACGGCC GCCCGGTGGT GACCCATTCT CCGCAGGACG GTCTGGCGAA CGGCATTGTG TATATCTCCG AAGACCGCAA GCGCGATGGC CTGGTGCTGG GGATGTCGGT GAAGGAAAAC ATGTCGCTGA CGGCACTGCG CTATTTCAGC CGTGCCGGTG GCAGCCTGAA ACAGGCAGAA GAGCAACAGG CCGTGGGTGA CTTCATCCGT TTGTTCAATA TCAAGACGCC GTCGATGGAA CAGCCGATTG GCCTGCTCTC CGGTGGCAAT CAACAGAAAG TGGCGATCGC CCGTGGCCTG ATGACGCGGC CAAAGGTGCT GATCCTCGAC GAGCCGACGC GCGGTGTCGA CGTCGGTGCA AAAAAAGAAA TCTATCAGTT AATCAACCAG TTCAAGCAGG AAGGGCTGAG CATCATTCTG GTGTCTTCGG AAATGCCGGA GGTGCTGGGC ATGAGCGACC GCATCCTGGT GATGCACGAA GGACATCTCA GCGGTGAATT CCCGATTGAA CAGGCCACCC AGGAAGCGTT GATGGCTGCG GCCGTTGGCA AGCAATACGG CGTAAAGCAG GAGTAA
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Protein sequence | MQPLLQLKGI DKAFPGVKAL SGAALSVYPG KVMALVGENG AGKSTMMKVL TGIYNKDAGS QYFLGKEVAF TGPKDSQEAG IGIIHQELNL IPQLTIAENI FLGREFVNRI GRIDWKRMYA EADKLLTRLN LSYSSHRLVG ELSIGDQQMV EIAKVLSFES KVIIMDEPTD ALTDTETASL FKVINELKAE GRGIVYISHR LKEIFEICDD VTVFRDGQFI AERPVSELQE DSLIEMMVGR KLEEQYPRLN LPRGEKRLEV SQVSGPGVDD VSFTLYRGEI LGVAGLMGAG RTELMKILYG AAPRKSGTVS LDGRPVVTHS PQDGLANGIV YISEDRKRDG LVLGMSVKEN MSLTALRYFS RAGGSLKQAE EQQAVGDFIR LFNIKTPSME QPIGLLSGGN QQKVAIARGL MTRPKVLILD EPTRGVDVGA KKEIYQLINQ FKQEGLSIIL VSSEMPEVLG MSDRILVMHE GHLSGEFPIE QATQEALMAA AVGKQYGVKQ E
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