Gene Spro_4898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4898 
Symbol 
ID5603464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5434464 
End bp5435354 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content56% 
IMG OID640940474 
ProductD-ribose transporter subunit RbsB 
Protein accessionYP_001481118 
Protein GI157373129 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00612951 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000869292 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGAAAA TGAAAAAACT GGCAATTCTG GCTTCAGCCT TCGCGCTGAG CGCCTCCCTT 
AGTGCTAACG CGCTGGCTAA AGACACCATC GCGCTGGTGG TTTCTACCCT GAATAACCCG
TTCTTTGTCT CAATGAAAGA GGGCGCACAG CAGGAAGCCA ATAAGCTGGG TTACAACCTG
GTGGTGCTGG ACTCGCAAAA TAACCCGGCG AAAGAACTGG CGAACGTACA GGATCTGATG
GTGCAGGCGC CCAAGTTGCT GCTGATTAAC CCAACCGACT CCGATGCGGT CGGCAACGCC
ATCAAGATGG CTAACCAGGC CAAGATCCCG GTCATTACCC TGGACCGTGT GGCGAGCAAA
GGTGAAGTGG TCAGCCATAT CGCTTCTGAT AACCGCGTCG GCGGTAAAAT GGCCGGTGAC
TTTATCGCTA AAAAAGTGGG TACGGACGCT AAAGTGATCC AGCTGGAAGG GATCGCCGGT
ACCTCCGCCG CCCGTGAACG TGGCGAAGGC TTTAAACAGT CGCTGGATCA GAACAAATTC
AAACTGCTGG CCAGCCAGCC GGCAGACTTC GACCGTACCA AGGGCCTGAA CGTGATGCAG
AACCTGCTGA CCGCTCACCC GGACGTACAG GCGGTATTTG CCCAGAATGA TGAAATGGCG
CTGGGTGCAC TGCGTGCGTT GCAAACCGCC GGTAAAACCG ACGTGGTCGT GGTAGGCTTC
GACGGCACCG CTGACGGCGT GAAAGCGGTT GAAGGCGGCA AACTGGCGGC GACCGTGGCG
CAGCGCCCGG ATCAGATCGG CGTGATTGGT GTGGAAACGG CGGATAAAGT GTTGAAAGGC
GAAAAAGTGC CGGCCACTAT CCCGGTTGAT CTGAAACTGG TCACTAAATA A
 
Protein sequence
MMKMKKLAIL ASAFALSASL SANALAKDTI ALVVSTLNNP FFVSMKEGAQ QEANKLGYNL 
VVLDSQNNPA KELANVQDLM VQAPKLLLIN PTDSDAVGNA IKMANQAKIP VITLDRVASK
GEVVSHIASD NRVGGKMAGD FIAKKVGTDA KVIQLEGIAG TSAARERGEG FKQSLDQNKF
KLLASQPADF DRTKGLNVMQ NLLTAHPDVQ AVFAQNDEMA LGALRALQTA GKTDVVVVGF
DGTADGVKAV EGGKLAATVA QRPDQIGVIG VETADKVLKG EKVPATIPVD LKLVTK