Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4884 |
Symbol | |
ID | 5602550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 5413029 |
End bp | 5414402 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640940456 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001481104 |
Protein GI | 157373115 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0254001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000556041 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGAGC AGGCAATTGT CTGGGATCTG GCCCTGATCC AGAAATATAA CTATTCAGGG CCGCGTTATA CCTCATACCC CACAGCGCTG GAGTTCAACC AGGGCTATGA CGAAGCGGCG TTTCAACGCG CTGCTGCGCG CTATCCAGAA CGTCCGCTGT CGCTGTATGT GCATATCCCT TTCTGCCACA AACTCTGCTA TTTCTGTGGC TGCAATAAAC TGGTGACGCG TCAGACGCAC AAGGCCGATG AATATCTGGC GGTGCTGGCA CAGGAAATCG CCCAGCGCGC GCCTCTGTTT GCCGGGCGTA AAGTTGGTCA GTTGCATTGG GGTGGCGGCA CACCGACCTA TCTGAGCAAG TCGCAAATCA GCAAGCTGGT GGCAATGCTG CGCCAACACT TTGATTTTCT CCCCGATTTG GAAATGTCGA TCGAAGTCGA TCCGCGCGAG ATTGAGCTGG ATGTGCTCGA TCATTTACGC AGCGAAGGCT TTAATCGCCT GAGCATGGGG GTGCAGGATT TCAATAAAGA AGTGCAGCGG CTGGTGAACC GTGAGCAGGA TGAAACCTTT ATCTTCGCTC TGATCGCTCG CGCCAAGGCT TTGGGCTTTA ACTCCACCAA TATTGATTTG ATCTACGGGC TGCCAAAGCA GACGCCGGAG AGCTTTGCTT ACACCCTGCA GCGGGTGGCG GAACTCAACC CGGATCGCCT CAGCGTATTT AACTACGCCC ACATGCCGAA CCTGTTTGCA GCCCAACGCA AAATCAAAGA TGCGGATTTG CCCAGCGCGC AGCAGAAACT GGATATCCTG CAGCAGACCA TCGCCTCGCT GACCGAGTCC GGCTATCAGT TTATCGGCAT GGACCACTTT GCCCGCCCGG ATGATGAACT GGCCGTGGCA CAGCGCGAAG GGAAACTGCA CCGCAACTTC CAGGGGTACA CCACTCAGGG TGACAGCGAT TTGCTGGGGC TGGGCGTATC CGCCATCAGC ATGCTGGGGG ACAGCTATGC CCAGAACCAG AAAGAGCTGA AGACCTATTA CAGTAGCGTA GAAGAGCAGG GGCATGCCTT GTGGCGCGGC TTGGCGATGA CGGAAGACGA CTGTCTGCGG CGTGAGGTAA TCAAAACGCT GATCTGCAAT TTCAAACTGG ACTATCTGGC AATAGAGCAA CAGTTCGCTA TCGACTTCGC CGGCTATTTT GCCGAAGACC TGCAACTGCT GGCACCGTTT GAACGTGATG GGCTGGTGGA GCGTGACGAG CAGGGTATTC GCGTTACACC GCGCGGTCGG TTGCTGATCC GCAATATTTG CATGTGTTTT GATATCTACC TGCGACAACA GGCGCGCACT CAGCAATTCT CTCGGGTTAT TTGA
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Protein sequence | MSEQAIVWDL ALIQKYNYSG PRYTSYPTAL EFNQGYDEAA FQRAAARYPE RPLSLYVHIP FCHKLCYFCG CNKLVTRQTH KADEYLAVLA QEIAQRAPLF AGRKVGQLHW GGGTPTYLSK SQISKLVAML RQHFDFLPDL EMSIEVDPRE IELDVLDHLR SEGFNRLSMG VQDFNKEVQR LVNREQDETF IFALIARAKA LGFNSTNIDL IYGLPKQTPE SFAYTLQRVA ELNPDRLSVF NYAHMPNLFA AQRKIKDADL PSAQQKLDIL QQTIASLTES GYQFIGMDHF ARPDDELAVA QREGKLHRNF QGYTTQGDSD LLGLGVSAIS MLGDSYAQNQ KELKTYYSSV EEQGHALWRG LAMTEDDCLR REVIKTLICN FKLDYLAIEQ QFAIDFAGYF AEDLQLLAPF ERDGLVERDE QGIRVTPRGR LLIRNICMCF DIYLRQQART QQFSRVI
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