| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4872 |
|---|
| Symbol | |
|---|
| ID | 5604919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 5396371 |
|---|
| End bp | 5397582 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640940444 |
|---|
| Product | sodium/glutamate symporter |
|---|
| Protein accession | YP_001481092 |
|---|
| Protein GI | 157373103 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0786] Na+/glutamate symporter |
|---|
| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.854487 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0119787 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCATC TTGATACTTA TGGCACGTTA GTCGCGGCAA CATTGGTTTT GCTCCTCGGG
GGCAAATGTG TCACCAGCAT TCCCCTGTTG AGAAAATACA CTATCCCCGC CCCTGTCGCC
GGTGGTTTGC TGGTGGCGCT CCTGTTGTTA GCCCTGAAAA AGCTGGTTAA CTGGGAAATC
AGCTTCGATA TGTCGCTAAA AGACCCGTTG ATGCTGGCCT TCTTCGCCAC CATCGGTCTG
AATGCCAACC TGGCGCGATT GCGTGCAGGC GGCAAGGCAT TAATGGTGTT CCTGTTTGTG
GTGCTGGGCC TGCTGCTGGT GCAGAACGCC ATCGGCATCG GCATGGCAAA AATGCTGGGT
CTGGATCCGC TGATGGGTCT GATTGCCGGC TCCATCACCT TGTCCGGTGG CCATGGCACC
GGGGCGGCCT GGAGCAAGCT GTTTATTGAA CGCTACGGGT TTGAAAACGC CACGGAAGTG
GCGATGGCCT GTGCCACCTT CGGGCTGGTT CTGGGTGGCC TGATCGGCGG CCCGGTTGCG
CGTTATCTGG TGAAACACTC GTCCACGCCG GAAGGCACGC CGGATGACAG CGTCCAGCCA
AGCGGTTTTG AAAAGCCGGA GAGCGGTCGT TTGATCACCT CGCTGGTCAT GATTGAAACC
ATCGCCATGA TCGCCATCTG TCTGAGTCTG GGGCAGCTTA TCGCCGGCCT GTTGAATGGT
ACGGTGTTTG AACTGCCAAA CTTCGTCTGC GTGCTGTTTG TTGGCGTGAT CCTCAGCAAC
ACCCTGGCCT TTACCGGCTT TTATACCGTG TTTGAACGCG CGGTATCGGT GCTGGGGAAC
GTCAGCCTGT CGCTGTTCCT GGCCATGGCA TTGATGAGCC TGCGGCTATG GGAGTTGGCT
TCGTTGGCGC TACCGATGTT GGCGATCCTG GCGGTGCAAA CGCTGGTGAT GGCGCTGTAC
GCGATTTTCG TCACCTACCG GGTGATGGGC AAAAACTACG ATGCGGCGGT TCTGGCTGCT
GGCCACTGTG GCTTCGGCAT GGGCGCGACG CCAACGGCGA TCGCCAATAT GCAGGCGATT
ACCGATCGCT TCGGCCCATC GCACCTGGCG TTTCTGGTGG TGCCGATGGT GGGGGCGTTC
TTTATTGATA TCGCCAACGC GATTGTGATT AAGCTGTATC TGCTGTTGCC GGTGTTCCCG
ACGATAGGTT GA
|
|---|
| Protein sequence | MFHLDTYGTL VAATLVLLLG GKCVTSIPLL RKYTIPAPVA GGLLVALLLL ALKKLVNWEI
SFDMSLKDPL MLAFFATIGL NANLARLRAG GKALMVFLFV VLGLLLVQNA IGIGMAKMLG
LDPLMGLIAG SITLSGGHGT GAAWSKLFIE RYGFENATEV AMACATFGLV LGGLIGGPVA
RYLVKHSSTP EGTPDDSVQP SGFEKPESGR LITSLVMIET IAMIAICLSL GQLIAGLLNG
TVFELPNFVC VLFVGVILSN TLAFTGFYTV FERAVSVLGN VSLSLFLAMA LMSLRLWELA
SLALPMLAIL AVQTLVMALY AIFVTYRVMG KNYDAAVLAA GHCGFGMGAT PTAIANMQAI
TDRFGPSHLA FLVVPMVGAF FIDIANAIVI KLYLLLPVFP TIG
|
|---|
| |