Gene Spro_4846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4846 
SymbolpyrE 
ID5603685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5364446 
End bp5365087 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content55% 
IMG OID640940419 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001481067 
Protein GI157373078 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0116277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000639801 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAGCCT ATCAGCGCCA GTTTATCGAG TTCGCGCTTA ACAAGCAGGT ATTGAAATTC 
GGCGAGTTCA CCCTGAAATC CGGCCGCACC AGCCCGTATT TCTTTAATGC CGGCCTGTTT
AATACCGGGC GTGATCTCGC GCTGTTAGGG CGCTTCTATG CCGAAGCGCT GGTGGATTCC
GGTATTGAGT TCGACCTGCT GTTTGGCCCG GCCTACAAAG GCATTCCGAT CGCGACCACC
ACGGCGGTTG CATTGGCAGA ACATCATGAG CGTGATGTGC CGTACTGCTT TAACCGTAAA
GAAGCCAAAA CCCATGGCGA AGGGGGCACT CTGGTAGGCA GCCCGCTGCA GGGCCGTGTA
ATGCTGGTGG ATGACGTCAT CACTGCCGGT ACGGCGATCC GTGAATCGAT GGAAATCATT
GGCGCTGGTG GTGCCACCCT GGCTGGGGTA TTGATTTCTC TCGATCGCCA GGAGCGCGGC
CGCGCGGATA TTTCTGCCAT TCAGGAAGTT GAGCGTGACT ATCACTGCAA GGTCATTTCC
ATCGTGACGC TGAAGGATTT GATTGTTTAT CTGGAAGAAA AACCTGAAAT GGCGGATCAC
CTGGCGGCAG TTCGTGCTTA TCGCGAGCAG TACGGGGTTT AA
 
Protein sequence
MKAYQRQFIE FALNKQVLKF GEFTLKSGRT SPYFFNAGLF NTGRDLALLG RFYAEALVDS 
GIEFDLLFGP AYKGIPIATT TAVALAEHHE RDVPYCFNRK EAKTHGEGGT LVGSPLQGRV
MLVDDVITAG TAIRESMEII GAGGATLAGV LISLDRQERG RADISAIQEV ERDYHCKVIS
IVTLKDLIVY LEEKPEMADH LAAVRAYREQ YGV