Gene Spro_4839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4839 
Symbol 
ID5607070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5359460 
End bp5360269 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content58% 
IMG OID640940412 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_001481060 
Protein GI157373071 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000052182 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000379227 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGAAT TACCAGAAGT TGAAACCAGC CGCCGCGGTA TTGAACCTTA CCTGGTTGGC 
CATAGTATTC AATATGCGGT GGTACGCAAT GCACGCCTGC GCTGGCCGGT CTCCGAGCAA
ATTCTGGCGT TGAGCGACCA GCCGGTACTC AGCGTACAGC GTCGCGCCAA GTATTTGCTG
ATTGAACTGG CTAGCGGCTG GATTATCGTC CATCTGGGGA TGTCAGGCAG TCTGCGGATG
TTGGCGGAGG AAACCGAGGC TGGAAAGCAC GACCACGTCG ATCTGGTGAT CAGCAATGGC
ATGACGCTCC GTTATACCGA TCCGCGCCGT TTTGGTGCCT GGCTATGGTG TGACGATCTG
GCGACCAGCA ATGTGCTGGC TCACCTTGGA CCGGAACCCT TGAGTGAAGC CTTTACCGGT
GCCTACCTGT ACGAAAAATC ACGCAACAAG CGGACGCTGA TCAAACCCTG GTTGATGGAT
AACAAGCTGG TGGTGGGCGT GGGCAATATC TACGCCAGTG AATCGTTGTT TACCGCCGGG
ATCCTGCCTG ACCGGCCTGC AGGCTCGCTG AGCAAGGTAG AAGCCGAAGT TTTGGTGGCA
ACCATTAAGG CGGTATTGCT GCGTTCGATT GAGCAGGGCG GTACCACGCT GCGTGATTTC
CTGCAGTCGG ACGGCAAGCC GGGTTATTTT GCGCAGGAAC TGCAGGTGTA TGGGCGAGCG
GGTGAGCCTT GCCGCGCGTG CGGCACGCCG ATCGAGTCCG CCAAGCACGG GCAGCGCAGC
ACTTTCTTCT GCCCACGCTG CCAGCGCTGA
 
Protein sequence
MPELPEVETS RRGIEPYLVG HSIQYAVVRN ARLRWPVSEQ ILALSDQPVL SVQRRAKYLL 
IELASGWIIV HLGMSGSLRM LAEETEAGKH DHVDLVISNG MTLRYTDPRR FGAWLWCDDL
ATSNVLAHLG PEPLSEAFTG AYLYEKSRNK RTLIKPWLMD NKLVVGVGNI YASESLFTAG
ILPDRPAGSL SKVEAEVLVA TIKAVLLRSI EQGGTTLRDF LQSDGKPGYF AQELQVYGRA
GEPCRACGTP IESAKHGQRS TFFCPRCQR