Gene Spro_4826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4826 
Symbol 
ID5606104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5346040 
End bp5347086 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content59% 
IMG OID640940399 
ProductADP-heptose:LPS heptosyltransferase II 
Protein accessionYP_001481047 
Protein GI157373058 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02195] lipopolysaccharide heptosyltransferase II 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.290967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000199841 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATAC TGGTTATCGG CCCTTCTTGG GTTGGCGATA TGATGATGTC GCAAAGTCTC 
TACCGCACCC TGAAGGCCGA GCACCCGACG GCAGAAATTG ATGTGATGGC ACCGGCCTGG
TGTCGTCCAT TACTGGCGCG CATGCCAGAG GTCAATCAGG CCCTGTCGAT GCCACTGGGC
CACGGTGCGC TGGCACTCGG TGAACGTCGA CGACTGGGGC ATGCCCTGCG AGCCAACGGC
TACGATCGCG CCTATGTGCT GCCGAACTCG TTCAAATCTG CGCTGGTGCC CTTCTTTGCC
AAGGTGCCGC AACGCACCGG CTGGCGCGGG GAAATGCGCT ATGGCGTGCT GAATGATATT
CGCTTGCTGG ACAAAGCCGC CTTCCCGCTG ATGGTGCAGC GTTACGTGGC ACTGGCCTAC
GATAAACAAC GCATTCAGCG CGCCGAAGAT CTGCCGCAGC CGCTACTGTG GCCGCAACTG
CAGGTCAGCG ACGAAGAGAT TGCCGAAACT ACCGCCGCCT TCAACCTGAC CGATCATCGG
CCGATTATCG GCTTTTGCCC CGGCGCCGAA TTTGGTCCGG CTAAACGCTG GCCGCACTAT
CACTATGCCG CTCTGGCGCA GAAGCTGATC GACCGGGGTT ATCAAATCGC CCTGTTTGGC
TCCGCCAAGG ATAATGAAGC GGGTGAGCAG ATACGGGCCG CGCTGGATGA TGACTCCCGT
GGCTTTTGCA TGAATCTGGC CGGGGAAACC CAGCTTGAGC AAGCGGTGAT CCTGCTGGCT
TCCTGTTCGG CCGTGGTCAG TAACGACTCC GGTTTGATGC ACGTAGCAGC CGCGTTGAAT
AAGCCGCTGA TTGCCTTGTA CGGCCCAAGC AGCCCGGACT TCACGCCGCC GCTGTCCGAC
AAGGCCAAAG TGATCCGATT AATTAGCGGT TACCATAAGA TACGCAAAGG CGATGCCGAT
CAGGGTTACC ATCAGAGTCT GATCGATATT CAGCCACAGC AGGTGTTGGA CGCGCTGACG
CCGTTACTTG CCGCCAGCGA GGAATAA
 
Protein sequence
MKILVIGPSW VGDMMMSQSL YRTLKAEHPT AEIDVMAPAW CRPLLARMPE VNQALSMPLG 
HGALALGERR RLGHALRANG YDRAYVLPNS FKSALVPFFA KVPQRTGWRG EMRYGVLNDI
RLLDKAAFPL MVQRYVALAY DKQRIQRAED LPQPLLWPQL QVSDEEIAET TAAFNLTDHR
PIIGFCPGAE FGPAKRWPHY HYAALAQKLI DRGYQIALFG SAKDNEAGEQ IRAALDDDSR
GFCMNLAGET QLEQAVILLA SCSAVVSNDS GLMHVAAALN KPLIALYGPS SPDFTPPLSD
KAKVIRLISG YHKIRKGDAD QGYHQSLIDI QPQQVLDALT PLLAASEE