Gene Spro_4825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4825 
SymbolrfaD 
ID5606103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5345087 
End bp5346016 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content55% 
IMG OID640940398 
ProductADP-L-glycero-D-mannoheptose-6-epimerase 
Protein accessionYP_001481046 
Protein GI157373057 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.375362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000198201 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTATCG TCACTGGTGG CGCCGGCATG ATCGGCAGCA ATATCATTAA GGCGCTGAAT 
GACACAGGGT ATCGCGATAT CCTGGTGGTA GATAACCTGA AAGACGGCAC CAAATTCGCC
AACCTGGTTG ATCTCGATAT CGCCGACTAT ATCGATAAAG AAGATTTCAT CGCCAACATC
ATTGCCGGTG ACGATCTGGG CGAAATCGAC GCCATCTTCC ATGAGGGCGC CTGCTCTTCC
ACCACCGAGT GGGACGGCAA GTACATGATG GACAATAACT ATCAGTACTC CAAAGACCTG
CTGCACTACT GCCTGGATCG TGAGATCCCG TTCCTGTATG CCTCGTCTGC TGCCACCTAC
GGCGGCCGCG AAGAATTTAT CGAAGAGCGC CAATTTGAAG CACCGCTGAA CGTCTACGGC
TACTCAAAAT TCCTGTTCGA CCAATATGTC CGTGAAATTC TGCCTGAGGC AGAATCACAG
ATCTGCGGCT TCCGTTACTT CAACGTCTAC GGCCCGCGCG AAGGCCACAA AGGCAGCATG
GCCAGCGTGG CGTTCCACCT GAACGGCCAG ATCAACCGTG GCGAGAACCC AAAACTGTTC
GACGGCAGTC AAGACTTCAA GCGTGACTTC ATCTACGTCG GCGACGTGGC GGCAGTGAAC
CTGTGGTTCT TGAAAAGCGG CGTATCCGGC ATCTTCAACT GCGGCACCGG CCGTGCGGAA
ACCTTCCAGG CGGTCGCCGA TGCCGTGGTC GACTTCCACC AGAAAGGTGC GGTAGAAAAC
ATTCCGTTCC CGGAAAAACT GAAGGGTCGC TACCAGGCAT TCACTCAGGC CGACCTGACC
AAACTGCGCG CTGCCGGCTA TGACGCGCCG TTCAAAACGG TCGCCGAAGG CGTGAAAGAG
TACATGGCCT GGTTAAACCG CACCGCTTAA
 
Protein sequence
MIIVTGGAGM IGSNIIKALN DTGYRDILVV DNLKDGTKFA NLVDLDIADY IDKEDFIANI 
IAGDDLGEID AIFHEGACSS TTEWDGKYMM DNNYQYSKDL LHYCLDREIP FLYASSAATY
GGREEFIEER QFEAPLNVYG YSKFLFDQYV REILPEAESQ ICGFRYFNVY GPREGHKGSM
ASVAFHLNGQ INRGENPKLF DGSQDFKRDF IYVGDVAAVN LWFLKSGVSG IFNCGTGRAE
TFQAVADAVV DFHQKGAVEN IPFPEKLKGR YQAFTQADLT KLRAAGYDAP FKTVAEGVKE
YMAWLNRTA