Gene Spro_4824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4824 
Symbol 
ID5606067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5343650 
End bp5344846 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content57% 
IMG OID640940397 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_001481045 
Protein GI157373056 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000213173 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGCGT CTTTTTATCA GCAGTTGGAA CAACAACTTG AGACCACCCG CAGCGAAGGT 
TTGTTCAAAG AAGAACGCAT TATTACCAGC GCTCAGCAGG CGGATATTGC CGTTGCTGAC
GGCCGCCATG TGATCAACTT CTGCGCCAAC AACTATCTTG GCCTGGCCAA CCACCCGGCA
ATGATTGCGG CAGCCAAGGC CGGTATGGAC AGCCACGGTT TCGGCATGGC GTCGGTACGC
TTTATCTGCG GCACCCAGGA CAGCCATAAA CAGCTGGAGC AAAAGCTGGC CGATTTTCTC
GGTATGGAAG ACGCCATTTT GTACTCCTCC TGCTTTGATG CCAACGGCGG GCTGTTCGAA
ACCCTGTTGG GCCCGGAAGA CGCGATTATC TCCGATGCGT TAAACCATGC GTCGATCATT
GACGGCGTTC GCCTGTGCAA GGCGAAGCGC TACCGTTACG CCAACAACGA CATGACCGAA
CTGGCTGCGC AGCTTGAGCA GGCGAAAGCC GACGGCGCAC GCCACATTAT GATCGCCACC
GACGGCGTGT TCTCAATGGA CGGTGTGATC GCCAACCTGA AAGGGGTGTG TGACCTGGCA
GACCAATATC AGGCGCTGGT GATGGTCGAT GACTCCCACG CGGTCGGTTT TGTCGGGGCC
AACGGGCGCG GCACCCACGA ATATTGTGAA GTCATGGGTC GCGTCGACAT CATTACCGGC
ACCCTGGGCA AGGCATTGGG CGGCGCTTCC GGCGGATATA CCGCAGCGAA AAAGGAAGTG
GTGGAGTGGC TGCGTCAGCG TTCGCGCCCA TATCTGTTCT CCAACTCGTT GGCACCGGCG
ATTGTCGCCG CTTCGATTAA AGTCCTGGAA CTGCTGGAGC AGGGTGACGC GTTGCGCGAC
CGCCTGTGGG CCAATGCCAG CCTGTTCCGT GAAAAAATGA CCGCGGCGGG CTTTACGCTG
GCCGGGGCCG ATCACGCCAT CATCCCGGTG ATGTTGGGTG AAGCAAAACT GGCGCAGGAA
TTTGCCAATG CGTTGCTCAA GGAAGGCATT TATGTAACGG GTTTCTTCTA TCCGGTGGTG
CCGAAAGGCC AGGCGCGCAT CCGTACCCAG ATGTCCGCCG ATCACACCCC GGAGCAAATT
GAACGTGCGA TTGCGGCGTT CATTCGTATC GGTAAAGATC TTGGCGTTAT TGCATAA
 
Protein sequence
MSASFYQQLE QQLETTRSEG LFKEERIITS AQQADIAVAD GRHVINFCAN NYLGLANHPA 
MIAAAKAGMD SHGFGMASVR FICGTQDSHK QLEQKLADFL GMEDAILYSS CFDANGGLFE
TLLGPEDAII SDALNHASII DGVRLCKAKR YRYANNDMTE LAAQLEQAKA DGARHIMIAT
DGVFSMDGVI ANLKGVCDLA DQYQALVMVD DSHAVGFVGA NGRGTHEYCE VMGRVDIITG
TLGKALGGAS GGYTAAKKEV VEWLRQRSRP YLFSNSLAPA IVAASIKVLE LLEQGDALRD
RLWANASLFR EKMTAAGFTL AGADHAIIPV MLGEAKLAQE FANALLKEGI YVTGFFYPVV
PKGQARIRTQ MSADHTPEQI ERAIAAFIRI GKDLGVIA