| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4793 |
|---|
| Symbol | hslU |
|---|
| ID | 5604986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 5312643 |
|---|
| End bp | 5313977 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640940366 |
|---|
| Product | ATP-dependent protease ATP-binding subunit HslU |
|---|
| Protein accession | YP_001481014 |
|---|
| Protein GI | 157373025 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000260414 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA TGACCCCGCG CGAGATCGTC AGCGAACTGG ACAGCTACAT CATTGGCCAG
AACAAAGCCA AACGTGCCGT TGCCATCGCC CTGCGTAACC GCTGGCGCCG GATGCAGCTC
AACGAGATGC TGCGCCACGA AGTCACGCCA AAGAACATTC TGATGATCGG CCCGACCGGC
GTCGGTAAAA CCGAAATCGC CCGCCGTCTG GCGAAACTGG CCAACGCGCC GTTCATCAAG
GTTGAAGCCA CCAAGTTCAC CGAAGTGGGC TACGTTGGGA AAGAAGTGGA TTCTATTATC
CGCGACCTGA CCGATGCTGC GATCAAAATG GTGCGTCTGC AATCAATCGA CAAGAACCGT
ACCCGCGCCG AAGAGCTGGC GGAAGAACGT ATCCTTGATG TGTTGATCCC ACCGGCCAAG
AACAACTGGG GCCAGGCGGA AGAGCATCAG GAGCCGTCCT CGGCACGCCA GGCATTCCGC
AAGAAACTGC GTGAAGGCCA GTTGGACGAC AAGGAAATCG AGATCGATCT GGCCGCAGCG
CCGATGGGCG TAGAAATCAT GGCTCCTCCT GGCATGGAAG AAATGACCAA CCAGCTGCAG
TCAATGTTCC AGAACCTCGG TGGCCAGAAG CAGAAACCAC GCAAGCTGAA GATCAAAGAA
GCCTTCAAAC TGCTGGTGGA AGAAGAAGCC GCCAAGCTGG TGAACCCGGA AGAGCTGAAA
GAACAGGCGA TCGAAGCGGT TGAGCAGCAC GGCATCGTGT TTATCGACGA GATCGACAAA
ATCTGTAAGC GCGGCGGCCA AAGCTCCGGC CCGGACGTGT CTCGCGAAGG CGTGCAGCGC
GACCTGCTGC CGCTGGTGGA AGGCTGTACC GTTTCCACCA AGCACGGGAT GGTGAAAACC
GATCACATTC TGTTTATCGC TTCCGGCGCA TTCCAGACCG CCAGCCCTTC AGACCTGATC
CCGGAACTGC AGGGTCGTCT GCCGATCCGC GTTGAGTTAC AGGCGCTGAC CACCGAAGAC
TTCGAGCGTA TTCTGACCGA GCCAAGCGCT TCGCTGACCG AGCAGTATAA AGCGCTGATG
GGCACCGAAG GCGTCAATAT CGAGTTCACC GCCGAAGGTA TCCGCCGCAT CGCCGAAGCC
GCATGGCAGG TTAACGAAAG CACCGAAAAC ATCGGCGCAC GTCGTTTGCA CACCGTGCTC
GAGCGTCTGA TGGAAGATAT TTCTTATGAT GCGAGTGAAA TTAACGGTCA ATCCATTACA
ATTGATGCGG ATTACGTACG TAATCATCTG GATGAACTGG TAGCGGATGA AGATTTGAGT
CGTTTTATCC TATAA
|
|---|
| Protein sequence | MSEMTPREIV SELDSYIIGQ NKAKRAVAIA LRNRWRRMQL NEMLRHEVTP KNILMIGPTG
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVDSII RDLTDAAIKM VRLQSIDKNR
TRAEELAEER ILDVLIPPAK NNWGQAEEHQ EPSSARQAFR KKLREGQLDD KEIEIDLAAA
PMGVEIMAPP GMEEMTNQLQ SMFQNLGGQK QKPRKLKIKE AFKLLVEEEA AKLVNPEELK
EQAIEAVEQH GIVFIDEIDK ICKRGGQSSG PDVSREGVQR DLLPLVEGCT VSTKHGMVKT
DHILFIASGA FQTASPSDLI PELQGRLPIR VELQALTTED FERILTEPSA SLTEQYKALM
GTEGVNIEFT AEGIRRIAEA AWQVNESTEN IGARRLHTVL ERLMEDISYD ASEINGQSIT
IDADYVRNHL DELVADEDLS RFIL
|
|---|
| |