Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4792 |
Symbol | |
ID | 5604985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 5312100 |
End bp | 5312630 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640940365 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_001481013 |
Protein GI | 157373024 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000178392 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGACAACAA TTGTAAGCGT ACGCCGTAAC GGCCAGGTAG TGATCGGTGG CGATGGCCAG GCTACCTTGG GCAATACGGT AATGAAGGGC AACGTCAAGA AAGTGCGTCG CCTGTATAAC GACAAAGTGA TTGCCGGTTT TGCCGGTGGC ACCGCGGATG CCTTCACGCT GTTTGAGCTG TTCGAGCGCA AGCTGGAAAT GCACCAGGGT CACCTGGTGA AAGCAGCCGT TGAATTAGCG AAAGACTGGC GCACCGACCG CATGCTGCGC AAGCTCGAAG CGCTGCTGGC AGTCGCGGAT GAAAACTCCT CGCTGATCAT CACCGGCAAC GGTGACGTGA TCCAGCCTGA AAATGATTTG ATTGCGATTG GCTCCGGCGG TCCGTACGCC CAGGCAGCCG CCCGCGCGAT GTTGGAAAAT ACCGAGCTGA GCGCCCGCGA AATTGTTGAT AAGTCTCTCA ACATCGCCGG TGACATCTGT ATTTACACCA ACCATTTCCA CACCATTGAA GAATTGCCTT CCAAAGCGTA A
|
Protein sequence | MTTIVSVRRN GQVVIGGDGQ ATLGNTVMKG NVKKVRRLYN DKVIAGFAGG TADAFTLFEL FERKLEMHQG HLVKAAVELA KDWRTDRMLR KLEALLAVAD ENSSLIITGN GDVIQPENDL IAIGSGGPYA QAAARAMLEN TELSAREIVD KSLNIAGDIC IYTNHFHTIE ELPSKA
|
| |