Gene Spro_4792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4792 
Symbol 
ID5604985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5312100 
End bp5312630 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content55% 
IMG OID640940365 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_001481013 
Protein GI157373024 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000178392 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGACAACAA TTGTAAGCGT ACGCCGTAAC GGCCAGGTAG TGATCGGTGG CGATGGCCAG 
GCTACCTTGG GCAATACGGT AATGAAGGGC AACGTCAAGA AAGTGCGTCG CCTGTATAAC
GACAAAGTGA TTGCCGGTTT TGCCGGTGGC ACCGCGGATG CCTTCACGCT GTTTGAGCTG
TTCGAGCGCA AGCTGGAAAT GCACCAGGGT CACCTGGTGA AAGCAGCCGT TGAATTAGCG
AAAGACTGGC GCACCGACCG CATGCTGCGC AAGCTCGAAG CGCTGCTGGC AGTCGCGGAT
GAAAACTCCT CGCTGATCAT CACCGGCAAC GGTGACGTGA TCCAGCCTGA AAATGATTTG
ATTGCGATTG GCTCCGGCGG TCCGTACGCC CAGGCAGCCG CCCGCGCGAT GTTGGAAAAT
ACCGAGCTGA GCGCCCGCGA AATTGTTGAT AAGTCTCTCA ACATCGCCGG TGACATCTGT
ATTTACACCA ACCATTTCCA CACCATTGAA GAATTGCCTT CCAAAGCGTA A
 
Protein sequence
MTTIVSVRRN GQVVIGGDGQ ATLGNTVMKG NVKKVRRLYN DKVIAGFAGG TADAFTLFEL 
FERKLEMHQG HLVKAAVELA KDWRTDRMLR KLEALLAVAD ENSSLIITGN GDVIQPENDL
IAIGSGGPYA QAAARAMLEN TELSAREIVD KSLNIAGDIC IYTNHFHTIE ELPSKA